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Author Correction: The Apostasia genome and the evolution of orchids

Authors :
Nobutaka Mitsuda
Wan Lin Wu
Yu Yun Hsiao
Yves Van de Peer
Kouki Yoshida
Lorenzo Pecoraro
Song Bin Chang
Yi-Bo Luo
Ke-Wei Liu
Shingo Sakamoto
Min Lin
Jie Yu Wang
Xin Ju Xiao
Rolf Lohaus
Shan Ce Niu
Sumire Fujiwara
Hui Xia Huang
Guo Hui Liu
Zhong Jian Liu
Masafumi Yagi
Yao-Cheng Lin
Wen Chieh Tsai
Chuan Ming Yeh
Qing Xu
Si Jin Zeng
Masaru Ohme-Takagi
Yong-Qiang Zhang
Guo-Qiang Zhang
Zhen Li
Meina Wang
Ching Yu Shen
Li Jun Chen
Zhi Wen Wang
Xin Yi Wu
You Yi Chen
Source :
Nature
Publication Year :
2020
Publisher :
Nature Publishing Group UK, 2020.

Abstract

Constituting approximately 10% of flowering plant species, orchids (Orchidaceae) display unique flower morphologies, possess an extraordinary diversity in lifestyle, and have successfully colonized almost every habitat on Earth. Here we report the draft genome sequence of Apostasia shenzhenica, a representative of one of two genera that form a sister lineage to the rest of the Orchidaceae, providing a reference for inferring the genome content and structure of the most recent common ancestor of all extant orchids and improving our understanding of their origins and evolution. In addition, we present transcriptome data for representatives of Vanilloideae, Cypripedioideae and Orchidoideae, and novel third-generation genome data for two species of Epidendroideae, covering all five orchid subfamilies. A. shenzhenica shows clear evidence of a whole-genome duplication, which is shared by all orchids and occurred shortly before their divergence. Comparisons between A. shenzhenica and other orchids and angiosperms also permitted the reconstruction of an ancestral orchid gene toolkit. We identify new gene families, gene family expansions and contractions, and changes within MADS-box gene classes, which control a diverse suite of developmental processes, during orchid evolution. This study sheds new light on the genetic mechanisms underpinning key orchid innovations, including the development of the labellum and gynostemium, pollinia, and seeds without endosperm, as well as the evolution of epiphytism; reveals relationships between the Orchidaceae subfamilies; and helps clarify the evolutionary history of orchids within the angiosperms.

Details

Language :
English
ISSN :
14764687 and 00280836
Volume :
583
Issue :
7818
Database :
OpenAIRE
Journal :
Nature
Accession number :
edsair.doi.dedup.....85fa46b59f8183450ab367ddfe88fb5c