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WT and A53T α-Synuclein Systems: Melting Diagram and Its New Interpretation
- Source :
- International Journal of Molecular Sciences, International Journal of Molecular Sciences, Vol 21, Iss 3997, p 3997 (2020), Volume 21, Issue 11
- Publication Year :
- 2020
- Publisher :
- MDPI AG, 2020.
-
Abstract
- The potential barriers governing the motions of &alpha<br />synuclein (&alpha<br />S) variants&rsquo<br />hydration water, especially energetics of them, is in the focus of the work. The thermodynamical approach yielded essential information about distributions and heights of the potential barriers. The proteins&rsquo<br />structural disorder was measured by ratios of heterogeneous water-binding interfaces. They showed the &alpha<br />S monomers, oligomers and amyloids to possess secondary structural elements, although monomers are intrinsically disordered. Despite their disordered nature, monomers have 33% secondary structure, and therefore they are more compact than a random coil. At the lowest potential barriers with mobile hydration water, monomers are already functional, a monolayer of mobile hydration water is surrounding them. Monomers realize all possible hydrogen bonds with the solvent water. &alpha<br />S oligomers and amyloids have half of the mobile hydration water amount than monomers because aggregation involves less mobile hydration. The solvent-accessible surface of the oligomers is ordered or homogenous in its interactions with water to 66%. As a contrast, &alpha<br />S amyloids are disordered or heterogeneous to 75% of their solvent accessible surface and both wild type and A53T amyloids show identical, low-level hydration. Mobile water molecules in the first hydration shell of amyloids are the weakest bound compared to other forms.
- Subjects :
- 0301 basic medicine
Amyloid
Magnetic Resonance Spectroscopy
bond energy
Protein Structure, Secondary
Article
Catalysis
Accessible surface area
lcsh:Chemistry
Inorganic Chemistry
03 medical and health sciences
chemistry.chemical_compound
NMR spectroscopy
Monolayer
Humans
Molecule
Physical and Theoretical Chemistry
lcsh:QH301-705.5
Molecular Biology
Protein secondary structure
Spectroscopy
030102 biochemistry & molecular biology
Hydrogen bond
Diagram
Organic Chemistry
aggregation
Water
Hydrogen Bonding
General Medicine
Recombinant Proteins
proteins
Random coil
Computer Science Applications
Crystallography
030104 developmental biology
Monomer
Solvation shell
lcsh:Biology (General)
lcsh:QD1-999
chemistry
Chemical physics
Mutation
Solvents
alpha-Synuclein
hydration
Protein Binding
Subjects
Details
- ISSN :
- 14220067
- Volume :
- 21
- Database :
- OpenAIRE
- Journal :
- International Journal of Molecular Sciences
- Accession number :
- edsair.doi.dedup.....85c637f571637f6b5561f9974fdb98b9
- Full Text :
- https://doi.org/10.3390/ijms21113997