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High-quality genome sequence and description of Paenibacillus dakarensis sp. nov
- Source :
- New Microbes and New Infections, Vol 10, Iss C, Pp 132-141 (2016), New Microbes and New Infections
- Publication Year :
- 2016
- Publisher :
- Elsevier BV, 2016.
-
Abstract
- Strain FF9T was isolated in Dakar (Senegal) from a blood-culture taken from a 16-month-old child. MALDI-TOF analysis did not allow for identification. After sequencing, strain FF9T exhibited 98.18% similarity with the 16SrRNA sequence of Paenibacillus uliginis. A polyphasic study of phenotypic and genomic analyses showed that strain FF9T is Gram variable, catalase-positive, and presents a genome of 4,569,428 bp (one chromosome but no plasmid) with 4,427genes (4,352 protein-coding and 75 RNA genes (including 3 rRNA operons). The G+C content is 45.7%. On the basis of these genomic and phenotypic data analyses, we propose the creation of Paenibacillus dakarensis strain FF9T.
- Subjects :
- 0301 basic medicine
taxono-genomics
030106 microbiology
Biology
Microbiology
Genome
lcsh:Infectious and parasitic diseases
03 medical and health sciences
Paenibacillus
Plasmid
New Microbes in Humans
lcsh:RC109-216
genome
Gene
Whole genome sequencing
Genetics
Culturomics
business.industry
Strain (biology)
Chromosome
biology.organism_classification
Biotechnology
030104 developmental biology
Infectious Diseases
Paenibacillus dakarensis
RRNA Operon
business
Subjects
Details
- ISSN :
- 20522975
- Volume :
- 10
- Database :
- OpenAIRE
- Journal :
- New Microbes and New Infections
- Accession number :
- edsair.doi.dedup.....850b492cb54c07d72a71ce74e931a1e4
- Full Text :
- https://doi.org/10.1016/j.nmni.2016.01.011