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Novel Insights into the Transcriptome of Dirofilaria immitis
- Source :
- PLoS ONE, Vol 7, Iss 7, p e41639 (2012), PLoS ONE
- Publication Year :
- 2012
- Publisher :
- Public Library of Science (PLoS), 2012.
-
Abstract
- BACKGROUND: The heartworm Dirofilaria immitis is the causal agent of cardiopulmonary dirofilariosis in dogs and cats, and also infects a wide range of wild mammals as well as humans. One bottleneck for the design of fundamentally new intervention and management strategies against D. immitis may be the currently limited knowledge of fundamental molecular aspects of D. immitis. METHODOLOGY/PRINCIPAL FINDINGS: A next-generation sequencing platform combining computational approaches was employed to assess a global view of the heartworm transcriptome. A total of 20,810 unigenes (mean length = 1,270 bp) were assembled from 22.3 million clean reads. From these, 15,698 coding sequences (CDS) were inferred, and about 85% of the unigenes had orthologs/homologs in public databases. Comparative transcriptomic study uncovered 4,157 filarial-specific genes as well as 3,795 genes potentially involved in filarial-Wolbachia symbiosis. In addition, the potential intestine transcriptome of D. immitis (1,101 genes) was mined for the first time, which might help to discover 'hidden antigens'. CONCLUSIONS/SIGNIFICANCE: This study provides novel insights into the transcriptome of D. immitis and sheds light on its molecular processes and survival mechanisms. Furthermore, it provides a platform to discover new vaccine candidates and potential targets for new drugs against dirofilariosis.
- Subjects :
- Male
Proteomics
lcsh:Medicine
Helminth genetics
Biochemistry
Transcriptome
Databases, Genetic
Genome Databases
Cluster Analysis
Genome Sequencing
lcsh:Science
Genes, Helminth
Expressed Sequence Tags
Genetics
Multidisciplinary
biology
Proteomic Databases
High-Throughput Nucleotide Sequencing
Genomics
Intestines
Veterinary Diseases
Female
Wolbachia
Veterinary Pathology
Research Article
Dirofilaria immitis
Molecular Sequence Data
Sequence Databases
Microbiology
Host-Parasite Interactions
Veterinary Epidemiology
Dogs
Sequence Homology, Nucleic Acid
parasitic diseases
Animals
RNA, Messenger
Biology
lcsh:R
Computational Biology
Molecular Sequence Annotation
Veterinary Parasitology
biology.organism_classification
Virology
Metabolism
Sequence homology
Gene Expression Regulation
Parasitology
Veterinary Science
lcsh:Q
Subjects
Details
- ISSN :
- 19326203
- Volume :
- 7
- Database :
- OpenAIRE
- Journal :
- PLoS ONE
- Accession number :
- edsair.doi.dedup.....839411c61b3c918ced0df2df3aef9703