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Operative list of genes associated with autism and neurodevelopmental disorders based on database review
- Source :
- Molecular and Cellular Neuroscience, Molecular and Cellular Neuroscience, 2021, 113, pp.103623. ⟨10.1016/j.mcn.2021.103623⟩, Molecular and Cellular Neuroscience, Elsevier, 2021, 113, pp.103623. ⟨10.1016/j.mcn.2021.103623⟩
- Publication Year :
- 2021
- Publisher :
- HAL CCSD, 2021.
-
Abstract
- International audience; The genetics of neurodevelopmental disorders (NDD) has made tremendous progress during the last few decades with the identification of more than 1,500 genes associated with conditions such as intellectual disability and autism. The functional roles of these genes are currently studied to uncover the biological mechanisms influencing the clinical outcome of the mutation carriers. To integrate the data, several databases and curated gene lists have been generated. Here, we provide an overview of the main databases focusing on the genetics of NDD, that are widely used by the medical and scientific communities, and extract a list of high confidence NDD genes (HC-NDD). This gene set can be used as a first filter for interpreting large scale omics dataset or for diagnostic purposes. Overall HC-NDD genes (N = 1,586) are expressed at very early stages of fetal brain development and enriched in several biological pathways such as chromosome organization, cell cycle, metabolism and synaptic function. Among those HC-NDD genes, 204 (12,9%) are listed in the synaptic gene ontology SynGO and are enriched in genes expressed after birth in the cerebellum and the cortex of the human brain. Finally, we point at several limitations regarding the relatively poor standardized information available, especially on the carriers of the mutations. Progress on the phenotypic characterization and genetic profiling of the carriers will be crucial to improve our knowledge on the biological mechanisms and on risk and protective factors for NDD.
- Subjects :
- Genetic diagnostic
High-confidence neurodevelopmental disorder genes
Developmental Disabilities
Autism
Biology
computer.software_genre
medicine.disease_cause
03 medical and health sciences
Cellular and Molecular Neuroscience
Databases
0302 clinical medicine
[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN]
Intellectual disability
Databases, Genetic
medicine
Humans
Gene Regulatory Networks
Genetic Predisposition to Disease
Protein Interaction Maps
Autistic Disorder
Molecular Biology
Gene
030304 developmental biology
0303 health sciences
Mutation
Database
Neurodevelopmental disorders
Cell Biology
Human brain
medicine.disease
Omics
Phenotype
3. Good health
medicine.anatomical_structure
[SDV.GEN.GH]Life Sciences [q-bio]/Genetics/Human genetics
Identification (biology)
Fetal brain expression & synaptic function
[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]
computer
030217 neurology & neurosurgery
Subjects
Details
- Language :
- English
- ISSN :
- 10447431 and 10959327
- Database :
- OpenAIRE
- Journal :
- Molecular and Cellular Neuroscience, Molecular and Cellular Neuroscience, 2021, 113, pp.103623. ⟨10.1016/j.mcn.2021.103623⟩, Molecular and Cellular Neuroscience, Elsevier, 2021, 113, pp.103623. ⟨10.1016/j.mcn.2021.103623⟩
- Accession number :
- edsair.doi.dedup.....822c4045a947c1e7399835737f72a1dd