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Common genetic variants at the CRAC1 (HMPS) locus on chromosome 15q13.3 influence colorectal cancer risk

Authors :
Zoe Kemp
Axel Walther
Steven J. Lubbe
Ian Tomlinson
Alan M. Pittman
Lynn Martin
Luis G. Carvajal-Carmona
Richard S. Houlston
Andrew Rowan
Albert Tenesa
Sarah L. Spain
Susan M. Farrington
Kate Sullivan
Huw Thomas
Julian Peto
David J. Kerr
Emily L. Webb
Ian Chandler
Karl Heinimann
Enric Domingo
Emma Jaeger
Malcolm G. Dunlop
Ella Barclay
Jean-Baptiste Cazier
Steven Penegar
Harry Campbell
Maggie Gorman
Richard Gray
Peter Broderick
Wendy Wood
Kimberley Howarth
Elli Papaemmanuil
Jayaram Vijayakrishnan
Mobshra Qureshi
Source :
Nature genetics. 40(1)
Publication Year :
2008

Abstract

We mapped a high-penetrance gene (CRAC1; also known as HMPS) associated with colorectal cancer (CRC) in the Ashkenazi population to a 0.6-Mb region on chromosome 15 containing SCG5 (also known as SGNE1), GREM1 and FMN1. We hypothesized that the CRAC1 locus harbored low-penetrance variants that increased CRC risk in the general population. In a large series of colorectal cancer cases and controls, SNPs near GREM1 and SCG5 were strongly associated with increased CRC risk (for rs4779584, P = 4.44 x 10(-14)).

Details

Language :
English
ISSN :
15461718 and 10614036
Volume :
40
Issue :
1
Database :
OpenAIRE
Journal :
Nature genetics
Accession number :
edsair.doi.dedup.....81dc7254dbabfbc35a21ffe2428734b3