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Global parenchymal texture features based on histograms of oriented gradients improve cancer development risk estimation from healthy breasts
- Source :
- RiuNet. Repositorio Institucional de la Universitat Politécnica de Valéncia, instname
- Publication Year :
- 2019
-
Abstract
- [EN] Background The breast dense tissue percentage on digital mammograms is one of the most commonly used markers for breast cancer risk estimation. Geometric features of dense tissue over the breast and the presence of texture structures contained in sliding windows that scan the mammograms may improve the predictive ability when combined with the breast dense tissue percentage. Methods A case/control study nested within a screening program covering 1563 women with craniocaudal and mediolateral-oblique mammograms (755 controls and the contralateral breast mammograms at the closest screening visit before cancer diagnostic for 808 cases) aging 45 to 70 from Comunitat Valenciana (Spain) was used to extract geometric and texture features. The dense tissue segmentation was performed using DMScan and validated by two experienced radiologists. A model based on Random Forests was trained several times varying the set of variables. A training dataset of 1172 patients was evaluated with a 10-stratified-fold cross-validation scheme. The area under the Receiver Operating Characteristic curve (AUC) was the metric for the predictive ability. The results were assessed by only considering the output after applying the model to the test set, which was composed of the remaining 391 patients. Results The AUC score obtained by the dense tissue percentage (0.55) was compared to a machine learning-based classifier results. The classifier, apart from the percentage of dense tissue of both views, firstly included global geometric features such as the distance of dense tissue to the pectoral muscle, dense tissue eccentricity or the dense tissue perimeter, obtaining an accuracy of 0.56. By the inclusion of a global feature based on local histograms of oriented gradients, the accuracy of the classifier was significantly improved (0.61). The number of well-classified patients was improved up to 236 when it was 208. Conclusion Relative geometric features of dense tissue over the breast and histograms of standardized local texture features based on sliding windows scanning the whole breast improve risk prediction beyond the dense tissue percentage adjusted by geometrical variables. Other classifiers could improve the results obtained by the conventional Random Forests used in this study.<br />This work was partially funded by Generalitat Valenciana through I+D IVACE (Valencian Institute of Business Competitiviness) and GVA (European Regional Development Fund) supports under the project IMAMCN/2018/1, and by Carlos III Institute of Health under the project DTS15/00080
- Subjects :
- Dense connective tissue
Risk
Computer science
Health Informatics
Breast Neoplasms
Risk Assessment
030218 nuclear medicine & medical imaging
Machine Learning
03 medical and health sciences
0302 clinical medicine
Breast cancer
Histogram
Parenchyma
medicine
Image Processing, Computer-Assisted
Humans
Segmentation
False Positive Reactions
Contralateral breast
Breast
Texture features
Parenchymal Tissue
Aged
Breast Density
Receiver operating characteristic
business.industry
Cancer development risk
Cancer
Pattern recognition
Middle Aged
medicine.disease
Computer Science Applications
ARQUITECTURA Y TECNOLOGIA DE COMPUTADORES
ROC Curve
Spain
Area Under Curve
Case-Control Studies
Breast density
Female
Artificial intelligence
business
LENGUAJES Y SISTEMAS INFORMATICOS
030217 neurology & neurosurgery
Software
Algorithms
Mammography
Subjects
Details
- ISSN :
- 18727565
- Volume :
- 177
- Database :
- OpenAIRE
- Journal :
- Computer methods and programs in biomedicine
- Accession number :
- edsair.doi.dedup.....80eb539dca1b8b52f7586511114ed170