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Association of vitamin D receptor FokI and ApaI polymorphisms with lung cancer risk in Tunisian population
- Source :
- Molecular biology reports. 41(10)
- Publication Year :
- 2013
-
Abstract
- Many studies reported that Vitamin D Receptor (VDR) gene polymorphisms might influence the cancer risk due to their antiproliferative, antiangiogenic, and apoptotic effects. The aim of this study was to explore the genetic association of VDR polymorphisms with lung cancer risk in Tunisian population. The genotype and haplotype frequencies of four VDR polymorphisms, FokI (rs2228570), BsmI (rs1544410), ApaI (rs7975232) and TaqI (rs731236) were studied using polymerase chain reaction and restriction fragment length polymorphism analysis in 240 patients with lung cancer and 280 healthy controls. The distribution of genotype frequencies differed significantly between lung cancer subjects and controls (FokI P adj = 0.002; ApaI P adj = 0.013). Haplotype analyses revealed a significant association between G-A-C and A-C-T haplotypes and lung cancer risk (P corr = 0.0128, P corr = 0.008). When patients were stratified according to gender, age, and smoking, significant associations were detected with FokI and TaqI polymorphisms. We found a lack of association between BsmI, TaqI polymorphisms and lung cancer risk (P > 0.05). Only, the attributable proportion due to interaction and the synergic index for interaction between ApaI polymorphism and smoking were statistically significant (P adj = 0.74, 95 % CI = 0.38-1.20) and (P adj = 0.63, 95 % CI = 0.05-1.21), respectively. Both the additive interaction measures suggested the existence of a biological interaction between SNP ApaI, but not FokI, and smoking. The multiplicative interaction measure was not statistically significant (P > 0.05). This is the first study in Tunisia, which suggested that VDR FokI and ApaI polymorphisms might be risk factors for lung cancer development.
- Subjects :
- Oncology
Adult
Male
Risk
medicine.medical_specialty
Lung Neoplasms
Tunisia
TaqI
Genotype
Single-nucleotide polymorphism
Bioinformatics
Calcitriol receptor
Polymorphism, Single Nucleotide
Linkage Disequilibrium
chemistry.chemical_compound
Gene Frequency
Internal medicine
Genetics
Odds Ratio
Medicine
Humans
Genetic Predisposition to Disease
Lung cancer
Molecular Biology
Alleles
Genetic Association Studies
Aged
Aged, 80 and over
Polymorphism, Genetic
biology
business.industry
Haplotype
General Medicine
Middle Aged
medicine.disease
FokI
Genotype frequency
chemistry
Haplotypes
Case-Control Studies
biology.protein
Receptors, Calcitriol
Female
business
Polymorphism, Restriction Fragment Length
Subjects
Details
- ISSN :
- 15734978
- Volume :
- 41
- Issue :
- 10
- Database :
- OpenAIRE
- Journal :
- Molecular biology reports
- Accession number :
- edsair.doi.dedup.....7fdd3ea079b2119a952b58ecdff9ac15