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Time-optimal control of piecewise affine bistable gene-regulatory networks: preliminary results
- Source :
- ADHS, ADHS 2021-7th IFAC Conference on Analysis and Design of Hybrid Systems, ADHS 2021-7th IFAC Conference on Analysis and Design of Hybrid Systems, IFAC, Jul 2021, Brussels, Belgium. ⟨10.1016/j.ifacol.2021.08.499⟩
- Publication Year :
- 2021
- Publisher :
- HAL CCSD, 2021.
-
Abstract
- International audience; In this preliminary work we give a geometric characterization of the time-optimal trajectories for a piecewise affine bistable switch. Such hybrid models play a major role in systems biology, as they can expressively account for the behaviors of simple gene-regulatory networks. A key example of these biological circuits is the genetic toggle switch, for which the optimality of a state switch has not been studied to the present day. The main tool of this work is an adaptation of the Hybrid Pontryagin's Maximum Principle to our setting, which allows to prove that the optimal control strategy is indeed a simple bang-bang feedback control law. In opposition to previous works, we show that a time-optimal transition between states should pass by an undifferentiated state, well known in cell biology for playing a major role in fate differentiation of cells. We conclude by showing numerical simulations of optimal trajectories illustrating the structure of the bang-bang optimal control for different scenarios.
- Subjects :
- 0209 industrial biotechnology
Hybrid systems
Bistability
Biological systems
Systems biology
[SDV]Life Sciences [q-bio]
010102 general mathematics
Gene regulatory network
Synthetic biological circuit
02 engineering and technology
Optimal control
01 natural sciences
Genetic toggle switch
020901 industrial engineering & automation
Maximum principle
Genetic Regulatory Systems
Control and Systems Engineering
Simple (abstract algebra)
Control theory
Hybrid system
[INFO.INFO-AU]Computer Science [cs]/Automatic Control Engineering
[MATH.MATH-OC]Mathematics [math]/Optimization and Control [math.OC]
0101 mathematics
Subjects
Details
- Language :
- English
- Database :
- OpenAIRE
- Journal :
- ADHS, ADHS 2021-7th IFAC Conference on Analysis and Design of Hybrid Systems, ADHS 2021-7th IFAC Conference on Analysis and Design of Hybrid Systems, IFAC, Jul 2021, Brussels, Belgium. ⟨10.1016/j.ifacol.2021.08.499⟩
- Accession number :
- edsair.doi.dedup.....7fb36f0635ad2a363e2fcc012354eeac
- Full Text :
- https://doi.org/10.1016/j.ifacol.2021.08.499⟩