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Accounting for competition in multi-environment tree genetic evaluations: a case study with hybrid pines

Authors :
Nuno Borralho
Eduardo P. Cappa
Ector Belaber
Maria Elena Gauchat
Cristian Damián Schoffen
Facundo Muñoz
Leopoldo Sanchez
Instituto Nacional de Tecnología Agropecuaria (INTA)
Consejo Nacional de Investigaciones Científicas y Técnicas [Buenos Aires] (CONICET)
Animal, Santé, Territoires, Risques et Ecosystèmes (UMR ASTRE)
Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
Département Systèmes Biologiques (Cirad-BIOS)
Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)
RAIZ – Forestry & Paper Research Institut
Instituto Superior Técnico, Universidade Técnica de Lisboa
Biologie intégrée pour la valorisation de la diversité des Arbres et de la Forêt (BioForA)
Office National des Forêts (ONF)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
This study was funded by the National Institute of Agricultural Technology (INTA) (grant numbers PNFOR-01104062, MSNES-1242204/5). E.P.C.’s research was partially supported by the National Agency for the Promotion of Science and Technology of Argentina (ANPCYT, PICT-2016 1048). F.M.’s research is partially supported by research grant MTM2016-77501-P from the State Research Agency of the Spanish Ministry of Science, Innovation and Universities jointly with the European Regional Development Fund, FEDER.
Source :
Annals of Forest Science, Annals of Forest Science, Springer Nature (since 2011)/EDP Science (until 2010), 2021, 78 (1), pp.2. ⟨10.1007/s13595-020-01015-2⟩, Annals of Forest Science, Springer Nature (since 2011)/EDP Science (until 2010), 2021, 78 (1), ⟨10.1007/s13595-020-01015-2⟩
Publication Year :
2021
Publisher :
Springer Science and Business Media LLC, 2021.

Abstract

International audience; Key message: A novel multi-environment competition individual-tree mixed model resulted in better fit, and greater individual narrow- and broad-sense heritabilities than the model without competition, notably for traits showing competition. In multi-environment tests, the proposed model would allow tree breeders to select genotypes with the best performance in both additive direct and competition breeding values, increasing forest productivity. Context: Genetic merit of trees is known to be affected and interact with local competition effects as well as changes across environmental conditions. Recent studies showed that competition genetic effects can affect the genetic variance and bias the tree breeding values, and its covariance with direct breeding values has been variable across traits. Aims: The present paper extends a mixed-model methodology to the problem of accounting for competition in a multi-environment set of forest genetic trials and exploring its impact on genetic variances as well as the multi-environment genetic correlation. Methods: The proposed model is illustrated using data from two full-sib trials of Pinus elliottii var. elliottii × Pinus caribaea var. hondurensis F1. Dispersion parameters and (co)variance of total breeding values were estimated for diameter at breast height, total tree height, and stem straightness at age 10. Results: For traits showing competition effects (diameter at breast height and total tree height), the proposed multi-environment competition model gave better fit than the simpler model. Accounting for competition increased the direct additive variance, reduced the residual variances, and did not change significantly the across-site additive genetic correlation. However, for diameter at breast height, top 5% best genetic rankings showed differences. Conclusion: When traits are strongly affected by inter-tree competition, the use of the proposed model in multi-environment analyses can efficiently identify the phenomenon with general benefits in the fitting of genetic components and open the door to select on the basis of competitiveness.

Details

ISSN :
1297966X and 12864560
Volume :
78
Database :
OpenAIRE
Journal :
Annals of Forest Science
Accession number :
edsair.doi.dedup.....7f1d59d950442fbeef47e6c0e0fdfdaa