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Arabidopsis thaliana dehydroascorbate reductase 2 : conformational flexibility during catalysis
- Source :
- SCIENTIFIC REPORTS
- Publication Year :
- 2017
-
Abstract
- Dehydroascorbate reductase (DHAR) catalyzes the glutathione (GSH)-dependent reduction of dehydroascorbate and plays a direct role in regenerating ascorbic acid, an essential plant antioxidant vital for defense against oxidative stress. DHAR enzymes bear close structural homology to the glutathione transferase (GST) superfamily of enzymes and contain the same active site motif, but most GSTs do not exhibit DHAR activity. The presence of a cysteine at the active site is essential for the catalytic functioning of DHAR, as mutation of this cysteine abolishes the activity. Here we present the crystal structure of DHAR2 from Arabidopsis thaliana with GSH bound to the catalytic cysteine. This structure reveals localized conformational differences around the active site which distinguishes the GSH-bound DHAR2 structure from that of DHAR1. We also unraveled the enzymatic step in which DHAR releases oxidized glutathione (GSSG). To consolidate our structural and kinetic findings, we investigated potential conformational flexibility in DHAR2 by normal mode analysis and found that subdomain mobility could be linked to GSH binding or GSSG release.
- Subjects :
- 0106 biological sciences
0301 basic medicine
Antioxidant
GLUTATHIONE TRANSFERASE P1-1
MOLECULAR-DYNAMICS SIMULATIONS
medicine.medical_treatment
01 natural sciences
03 medical and health sciences
chemistry.chemical_compound
POPULUS-TRICHOCARPA
medicine
Transferase
Arabidopsis thaliana
NORMAL-MODE
chemistry.chemical_classification
INDUCED-FIT MECHANISM
Multidisciplinary
ANALYSIS
biology
Chemistry
Active site
Biology and Life Sciences
Glutathione
Ascorbic acid
biology.organism_classification
PERFORMANCE LIQUID-CHROMATOGRAPHY
SULFENIC ACID
030104 developmental biology
Enzyme
Biochemistry
ASCORBIC-ACID
WEB SERVER
NETWORK MODEL
biology.protein
010606 plant biology & botany
Cysteine
Subjects
Details
- Language :
- English
- ISSN :
- 20452322
- Database :
- OpenAIRE
- Journal :
- SCIENTIFIC REPORTS
- Accession number :
- edsair.doi.dedup.....7ee171c1164a707ccb8aad4bb48e4288