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Methanohalophilus profundi sp. nov., a methylotrophic halophilic piezophilic methanogen isolated from a deep hypersaline anoxic basin
- Source :
- Systematic And Applied Microbiology (0723-2020) (Elsevier BV), 2020-09, Vol. 43, N. 5, P. 126107 (8p.), Systematic and Applied Microbiology, Systematic and Applied Microbiology, 2020, 43 (5), pp.126107. ⟨10.1016/j.syapm.2020.126107⟩, Systematic and Applied Microbiology, Elsevier, 2020, 43 (5), pp.126107. ⟨10.1016/j.syapm.2020.126107⟩
- Publication Year :
- 2020
- Publisher :
- Elsevier BV, 2020.
-
Abstract
- International audience; A novel anaerobic methylotrophic halophilic methanogen strain SLHTYRO T was isolated from a deep hypersaline anoxic basin called "Tyro" located in the Eastern Mediterranean Sea. Cells of SLHTYRO T were motile cocci. The strain SLHTYRO T grew between 12 and 37 °C (optimum 30 °C), at pH between 6.5 and 8.2 (optimum pH 7.5) and salinity from 45 to 240 g L −1 NaCl (optimum 135 g L −1). Strain SLHTYRO T was methylotrophic methanogen able to use methylated compounds (trimethylamine, dimethylamine, monomethylamine and methanol). Strain SLHTYRO T was able to grow at in situ hydrostatic pressure and temperature conditions (35 MPa, 14 °C). Phylogenetic analysis based on 16S rRNA gene and mcrA gene sequences indicated that strain SLHTYRO T was affiliated to genus Methanohalophilus within the order Methanosarcinales. It shared >99.16% of the 16S rRNA gene sequence similarity with strains of other Methanohalophilus species. Based on ANIb, AAI and dDDH measurements, and the physiological properties of the novel isolate, we propose that strain SLHTYRO T should be classified as a representative of a novel species, for which the name Methanohalophilus profundi sp. nov. is proposed; the type strain is SLHTYRO T (=DSM 108854 = JCM 32768 = UBOCC-M-3308).
- Subjects :
- Salinity
MESH: Hydrogen-Ion Concentration
Hydrostatic pressure
MESH: Methanol
Applied Microbiology and Biotechnology
Genes, Archaeal
MESH: Methylamines
RNA, Ribosomal, 16S
Anaerobiosis
MESH: Phylogeny
Phylogeny
MESH: Methanosarcinaceae
Methanosarcinaceae
0303 health sciences
biology
Strain (chemistry)
Temperature
Hydrogen-Ion Concentration
Methanogen
MESH: Temperature
Halophile
MESH: RNA, Ribosomal, 16S
RNA, Bacterial
[SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology
Methanosarcinales
Water Microbiology
MESH: RNA, Bacterial
Deep hypersalin anoxic basin (DHAB)
MESH: Mediterranean Sea
Methanohalophilus
Microbiology
MESH: Genes, Archaeal
Methylamines
03 medical and health sciences
MESH: Hydrostatic Pressure
[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN]
MESH: Anaerobiosis
Botany
Hydrostatic Pressure
Mediterranean Sea
Piezophilic
Seawater
Ecology, Evolution, Behavior and Systematics
030304 developmental biology
[SDV.EE.SANT]Life Sciences [q-bio]/Ecology, environment/Health
030306 microbiology
Methanol
MESH: Seawater
[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular biology
16S ribosomal RNA
biology.organism_classification
[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology
MESH: Water Microbiology
Methylotrophic
[SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie
MESH: Salinity
Subjects
Details
- Language :
- English
- ISSN :
- 07232020
- Database :
- OpenAIRE
- Journal :
- Systematic And Applied Microbiology (0723-2020) (Elsevier BV), 2020-09, Vol. 43, N. 5, P. 126107 (8p.), Systematic and Applied Microbiology, Systematic and Applied Microbiology, 2020, 43 (5), pp.126107. ⟨10.1016/j.syapm.2020.126107⟩, Systematic and Applied Microbiology, Elsevier, 2020, 43 (5), pp.126107. ⟨10.1016/j.syapm.2020.126107⟩
- Accession number :
- edsair.doi.dedup.....7e09120d3c53b83dd802af11453eb850
- Full Text :
- https://doi.org/10.1016/j.syapm.2020.126107⟩