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MetaPASS: A Web Application for Analyzing the Biological Activity Spectrum of Organic Compounds Taking into Account their Biotransformation
- Source :
- Molecular informaticsReferences. 40(4)
- Publication Year :
- 2020
-
Abstract
- Most drug-like compounds can interact with several pharmacological targets and exhibit complex biological activity spectra. Analysis of these spectra helps find and optimize new pharmaceutical agents or identify new uses for approved and investigational drugs (drug repurposing). Since most pharmaceuticals usually undergo biotransformation in the human body, it is reasonable during drug discovery to take into account biological activity spectra of metabolites. A new freely available MetaPASS web application (http://www.way2drug.com/metapass) has been developed for analyzing the probable biological activity spectra of drug-like organic compounds taking into account their metabolites - integrated activity profile. To obtain an integrated biological activity profile, one can create a biotransformation network for any compound or analyze known networks for more than 950 compounds from ChEBML and DrugBank. Biological activity profile prediction is based on the PASS Refined software that predicts 1,333 biological activities with an average accuracy (IAP, calculated by leave-one-out cross-validation procedure) exceeded 0.97.
- Subjects :
- Computational biology
01 natural sciences
03 medical and health sciences
Biotransformation
Structural Biology
Drug Discovery
Web application
Organic Chemicals
030304 developmental biology
0303 health sciences
Chemistry
business.industry
Drug discovery
Organic Chemistry
Biological activity
0104 chemical sciences
Computer Science Applications
010404 medicinal & biomolecular chemistry
Drug repositioning
Investigational Drugs
Molecular Medicine
business
DrugBank
Drug metabolism
Software
Subjects
Details
- ISSN :
- 18681751
- Volume :
- 40
- Issue :
- 4
- Database :
- OpenAIRE
- Journal :
- Molecular informaticsReferences
- Accession number :
- edsair.doi.dedup.....7d0f876b6cf9cc4e023a98c314b8a3da