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Expression of miR-486-5p and its significance in lung squamous cell carcinoma

Authors :
Tong Liu
Xiaomei Zhang
Lihong Yin
Sheng Yang
Yuepu Pu
Geyu Liang
Jing Sui
Siyi Xu
Bo Shen
Yan Zhang
Wenjuan Wu
Source :
Journal of cellular biochemistry. 120(8)
Publication Year :
2018

Abstract

Lung squamous cell carcinoma (LUSC) is one of the main histological types of lung cancer with high mortality. The role of microRNA-486-5p in LUSC remains unclear. In the current study, the aim was to explore miR-486-5p expression and its role in LUSC. The miR-486-5p expression was significantly low-expressed in patients with LUSC from The Cancer Genome Atlas database, which was further confirmed in the Gene Expression Omnibus database, patients' tissues, different cell lines by quantitative real-time polymerase chain reaction, and the high-throughput gene sequencing data of lung tissues of mice after a long-term B(a)P exposure. The meta-analysis was performed to evaluate the expression and diagnosis power of miR-486-5p (standard mean difference = -2.25; 95% confidence interval: -3.47 to -1.03; P = 0.0003; area under curve = 0.9082). Functional enrichment analysis revealed the potential function of miR-486-5p in LUSC using gene set enrichment analysis and clusterProfiler package in R software. At last, the hub genes (PTEN, TEK, PIK3R1, PPM1B, SMAD2, and SPTA1) of miR-486-5p were verified. In conclusion, miR-486-5p may be a LUSC antioncogene, playing an important role to serve as a biomarker in LUSC.

Details

ISSN :
10974644
Volume :
120
Issue :
8
Database :
OpenAIRE
Journal :
Journal of cellular biochemistry
Accession number :
edsair.doi.dedup.....7cd6cbe9fe95f323b8f9ba021897e90b