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Expression of miR-486-5p and its significance in lung squamous cell carcinoma
- Source :
- Journal of cellular biochemistry. 120(8)
- Publication Year :
- 2018
-
Abstract
- Lung squamous cell carcinoma (LUSC) is one of the main histological types of lung cancer with high mortality. The role of microRNA-486-5p in LUSC remains unclear. In the current study, the aim was to explore miR-486-5p expression and its role in LUSC. The miR-486-5p expression was significantly low-expressed in patients with LUSC from The Cancer Genome Atlas database, which was further confirmed in the Gene Expression Omnibus database, patients' tissues, different cell lines by quantitative real-time polymerase chain reaction, and the high-throughput gene sequencing data of lung tissues of mice after a long-term B(a)P exposure. The meta-analysis was performed to evaluate the expression and diagnosis power of miR-486-5p (standard mean difference = -2.25; 95% confidence interval: -3.47 to -1.03; P = 0.0003; area under curve = 0.9082). Functional enrichment analysis revealed the potential function of miR-486-5p in LUSC using gene set enrichment analysis and clusterProfiler package in R software. At last, the hub genes (PTEN, TEK, PIK3R1, PPM1B, SMAD2, and SPTA1) of miR-486-5p were verified. In conclusion, miR-486-5p may be a LUSC antioncogene, playing an important role to serve as a biomarker in LUSC.
- Subjects :
- 0301 basic medicine
Lung Neoplasms
Down-Regulation
Biochemistry
law.invention
PPM1B
03 medical and health sciences
0302 clinical medicine
law
PIK3R1
Cell Line, Tumor
Databases, Genetic
medicine
PTEN
Humans
Lung cancer
Molecular Biology
Gene
Polymerase chain reaction
Lung
biology
Reproducibility of Results
Cell Biology
medicine.disease
Gene Expression Regulation, Neoplastic
MicroRNAs
030104 developmental biology
medicine.anatomical_structure
ROC Curve
Cell culture
030220 oncology & carcinogenesis
biology.protein
Cancer research
Carcinoma, Squamous Cell
Genes, Neoplasm
Subjects
Details
- ISSN :
- 10974644
- Volume :
- 120
- Issue :
- 8
- Database :
- OpenAIRE
- Journal :
- Journal of cellular biochemistry
- Accession number :
- edsair.doi.dedup.....7cd6cbe9fe95f323b8f9ba021897e90b