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Corrigendum: Updated classification of norovirus genogroups and genotypes

Authors :
Preeti Chhabra
Martin C.W. Chan
Vito Martella
Kim Y. Green
Gabriel I. Parra
Harry Vennema
Miranda de Graaf
Marion Koopmans
Kazuhiko Katayama
Jan Vinjé
Qiuhong Wang
Peter A. White
Source :
The Journal of general virology. 101(8)
Publication Year :
2020

Abstract

Noroviruses are genetically diverse RNA viruses associated with acute gastroenteritis in mammalian hosts. Phylogenetically, they can be segregated into different genogroups as well as P (polymerase)-groups and further into genotypes and P-types based on amino acid diversity of the complete VP1 gene and nucleotide diversity of the RNA-dependent RNA polymerase (RdRp) region of ORF1, respectively. In recent years, several new noroviruses have been reported that warrant an update of the existing classification scheme. Using previously described 2× standard deviation (sd) criteria to group sequences into separate clusters, we expanded the number of genogroups to 10 (GI-GX) and the number of genotypes to 49 (9 GI, 27 GII, 3 GIII, 2 GIV, 2 GV, 2 GVI and 1 genotype each for GVII, GVIII, GIX [formerly GII.15] and GX). Viruses for which currently only one sequence is available in public databases were classified into tentative new genogroups (GNA1 and GNA2) and genotypes (GII.NA1, GII.NA2 and GIV.NA1) with their definitive assignment awaiting additional related sequences. Based on nucleotide diversity in the RdRp region, noroviruses can be divided into 60 P-types (14 GI, 37 GII, 2 GIII, 1 GIV, 2 GV, 2 GVI, 1 GVII and 1 GX), 2 tentative P-groups and 14 tentative P-types. Future classification and nomenclature updates will be based on complete genome sequences and will be coordinated and disseminated by the international norovirus classification-working group.

Details

ISSN :
14652099
Volume :
101
Issue :
8
Database :
OpenAIRE
Journal :
The Journal of general virology
Accession number :
edsair.doi.dedup.....7aa13ded5d892af33ac8d6d048cc22e9