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The complete mitochondrial genome of the Ailanthus silkmoth, Samia cynthia cynthia (Lepidoptera: Saturniidae)
- Source :
- Gene. 526:309-317
- Publication Year :
- 2013
- Publisher :
- Elsevier BV, 2013.
-
Abstract
- The complete mitochondrial genome (mitogenome) of the Ailanthus silkmoth, Samia cynthia cynthia (Lepidoptera: Saturniidae) was determined. The circular genome is 15,345 bp long, and presents a typical gene organization and order for sequenced mitogenomes of Bombycidea species. The nucleotide composition of the genome is highly A+T biased, accounting for 79.86%. The AT skew of the genome is slightly negative, indicating the occurrence of more Ts than As, as found in other Saturniidae species. All protein-coding genes (PCGs) are initiated by ATN codons, except for COI and COII, which are tentatively designated by CGA and GTG, respectively, as observed in other insects. Four of 13 PCGs, including COI, COII, ATP6, and ND3, harbor the incomplete termination codons, T or TA. With an exception for tRNASer(AGN), all other tRNAs can form a typical clover-leaf structure of mitochondrial tRNA. The 359 bp A+T-rich region of S. c. cynthia contains non-repetitive sequences, but harbors several features common to the Bombycidea insects, including the motif ATAGA followed by a poly-T stretch of 19 bp, a microsatellite-like (AT)7 element preceded by the ATTTA motif, and a poly-A element upstream tRNAMet. The phylogenetic analyses support the morphology-based current hypothesis that Bombycidae and Saturniidae are monophyletic. Our result confirms that Saturniini and Attacini form a reciprocal monophyletic group within Saturniidae.
- Subjects :
- Mitochondrial DNA
Molecular Sequence Data
Genome
Bombycidae
Open Reading Frames
Monophyly
RNA, Transfer
Saturniidae
Gene Order
Samia cynthia
Genetics
Animals
Gene
Phylogeny
Base Composition
Base Sequence
Phylogenetic tree
biology
fungi
Genomics
General Medicine
Bombyx
biology.organism_classification
RNA, Ribosomal
Genome, Mitochondrial
Nucleic Acid Conformation
DNA, Intergenic
Sequence Alignment
Subjects
Details
- ISSN :
- 03781119
- Volume :
- 526
- Database :
- OpenAIRE
- Journal :
- Gene
- Accession number :
- edsair.doi.dedup.....78cdf6112369d6e7342a80ec0157a1c3
- Full Text :
- https://doi.org/10.1016/j.gene.2013.05.048