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Identification of an Endoglin Variant Associated With HCV-Related Liver Fibrosis Progression by Next-Generation Sequencing

Authors :
Frédégonde About
Stéphanie Bibert
Emmanuelle Jouanguy
Bertrand Nalpas
Lazaro Lorenzo
Vimel Rattina
Mohammed Zarhrate
Sylvain Hanein
Mona Munteanu
Beat Müllhaupt
David Semela
Nasser Semmo
Jean-Laurent Casanova
Ioannis Theodorou
Philippe Sultanik
Thierry Poynard
Stanislas Pol
Pierre-Yves Bochud
Aurélie Cobat
Laurent Abel
The Swiss Hepatitis C Cohort Study Group
The French ANRS HC EP 26 Genoscan Study Group
Francesco Negro
Antoine Hadengue
Laurent Kaiser
Laura Rubbia-Brandt
Darius Moradpour
Cristina Cellerai
Martin Rickenbach
Andreas Cerny
Gladys Martinetti
Jean-François Dufour
Meri Gorgievski
Virginie Masserey Spicher
Markus Heim
Hans Hirsch
Beat Helbling
Stephan Regenass
Raffaele Malinverni
Guenter Dollenmaier
Gieri Cathomas
University of Zurich
Cobat, Aurélie
Negro, Francesco
Hadengue, Antoine
Kaiser, Laurent
Rubbia-Brandt, Laura
Swiss Hepatitis C Cohort Study Group
French ANRS HC EP 26 Genoscan Study Group
Negro, F.
Hadengue, A.
Kaiser, L.
Rubbia-Brandt, L.
Moradpour, D.
Cellerai, C.
Rickenbach, M.
Cerny, A.
Martinetti, G.
Dufour, J.F.
Gorgievski, M.
Spicher, V.M.
Heim, M.
Hirsch, H.
Helbling, B.
Regenass, S.
Malinverni, R.
Dollenmaier, G.
Cathomas, G.
Bousquet, L.
Ngo, Y.
Lebray, P.
Moussalli, J.
Benhamou, Y.
Thabut, D.
Vallet-Pichard, A.
Fontaine, H.
Mallet, V.
Sogni, P.
Trabut, J.B.
Bourlière, M.
Delfraissy, J.F.
Imagine - Institut des maladies génétiques (IMAGINE - U1163)
Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)
Infectious Disease Service, Department of Internal Medicine
Université de Lausanne = University of Lausanne (UNIL)
CHU Necker - Enfants Malades [AP-HP]
Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)
Université Paris Descartes - Paris 5 (UPD5)
Centre Hospitalier Universitaire de Nîmes (CHU Nîmes)
Université de Montpellier (UM)
Hôpital Universitaire de Réadaptation, de Rééducation et d'Addictologie du CHU de Nîmes [Grau-du-Roi] (CHU Nîmes)
BioPredictive [Paris]
University hospital of Zurich [Zurich]
University of Bern
Bern University Hospital [Berne] (Inselspital)
Laboratory of Human Genetics of Infectious Diseases (Necker Branch - INSERM U1163)
Institut National de la Santé et de la Recherche Médicale (INSERM)-CHU Necker - Enfants Malades [AP-HP]
Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)
Rockefeller University [New York]
Centre d'Immunologie et des Maladies Infectieuses (CIMI)
Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)
Physiopathologie du système immunitaire (Inserm U1223)
Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)
Unité de Recherche sur les Maladies Cardiovasculaires, du Métabolisme et de la Nutrition = Research Unit on Cardiovascular and Metabolic Diseases (ICAN)
Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Institut de Cardiométabolisme et Nutrition = Institute of Cardiometabolism and Nutrition [CHU Pitié Salpêtrière] (IHU ICAN)
CHU Pitié-Salpêtrière [AP-HP]
Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU)-CHU Pitié-Salpêtrière [AP-HP]
Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU)
Centre Hospitalier Universitaire Vaudois [Lausanne] (CHUV)
Génétique Humaine des Maladies Infectieuses (Inserm U980)
Source :
About, Frédégonde; Bibert, Stéphanie; Jouanguy, Emmanuelle; Nalpas, Bertrand; Lorenzo, Lazaro; Rattina, Vimel; Zarhrate, Mohammed; Hanein, Sylvain; Munteanu, Mona; Müllhaupt, Beat; Semela, David; Semmo, Nasser; Casanova, Jean-Laurent; Theodorou, Ioannis; Sultanik, Philippe; Poynard, Thierry; Pol, Stanislas; Bochud, Pierre-Yves; Cobat, Aurélie and Abel, Laurent (2019). Identification of an Endoglin Variant Associated With HCV-Related Liver Fibrosis Progression by Next-Generation Sequencing. Frontiers in genetics, 10(1024), p. 1024. Frontiers Media SA 10.3389/fgene.2019.01024 , Frontiers in Genetics, Vol. 10 (2019) P. 1024, Frontiers in genetics, vol. 10, pp. 1024, Frontiers in Genetics, Frontiers in Genetics, 2019, 10, ⟨10.3389/fgene.2019.01024⟩, Frontiers in Genetics, Vol 10 (2019)
Publication Year :
2019
Publisher :
Frontiers Media SA, 2019.

Abstract

International audience; Despite the astonishing progress in treating chronic hepatitis C virus (HCV) infection with direct-acting antiviral agents, liver fibrosis remains a major health concern in HCV infected patients, in particular due to the treatment cost and insufficient HCV screening in many countries. Only a fraction of patients with chronic HCV infection develop liver fibrosis. While there is evidence that host genetic factors are involved in the development of liver fibrosis, the common variants identified so far, in particular by genome-wide association studies, were found to have limited effects. Here, we conducted an exome association study in 88 highly selected HCV-infected patients with and without fibrosis. A strategy focusing on TGF-β pathway genes revealed an enrichment in rare variants of the endoglin gene (ENG) in fibrosis patients. Replication studies in additional cohorts (617 patients) identified one specific ENG variant, Thr5Met, with an overall odds ratio for fibrosis development in carriers of 3.04 (1.39-6.69). Our results suggest that endoglin, a key player in TGF-β signaling, is involved in HCV-related liver fibrogenesis.

Details

Language :
English
ISSN :
16648021
Database :
OpenAIRE
Journal :
About, Fr&#233;d&#233;gonde; Bibert, St&#233;phanie; Jouanguy, Emmanuelle; Nalpas, Bertrand; Lorenzo, Lazaro; Rattina, Vimel; Zarhrate, Mohammed; Hanein, Sylvain; Munteanu, Mona; M&#252;llhaupt, Beat; Semela, David; Semmo, Nasser; Casanova, Jean-Laurent; Theodorou, Ioannis; Sultanik, Philippe; Poynard, Thierry; Pol, Stanislas; Bochud, Pierre-Yves; Cobat, Aur&#233;lie and Abel, Laurent (2019). Identification of an Endoglin Variant Associated With HCV-Related Liver Fibrosis Progression by Next-Generation Sequencing. Frontiers in genetics, 10(1024), p. 1024. Frontiers Media SA 10.3389/fgene.2019.01024 <http://dx.doi.org/10.3389/fgene.2019.01024>, Frontiers in Genetics, Vol. 10 (2019) P. 1024, Frontiers in genetics, vol. 10, pp. 1024, Frontiers in Genetics, Frontiers in Genetics, 2019, 10, ⟨10.3389/fgene.2019.01024⟩, Frontiers in Genetics, Vol 10 (2019)
Accession number :
edsair.doi.dedup.....78ba7d8c941fe81de19d18bf86c2e5ab
Full Text :
https://doi.org/10.3389/fgene.2019.01024