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Genetic Association of ACE2 rs2285666 Polymorphism With COVID-19 Spatial Distribution in India

Authors :
Pavan Kumar Dubey
Nargis Khanam
Vanya Singh
Gazi Nurun Nahar Sultana
N.K. Srivastava
Pranav Gupta
Rudra Kumar Pandey
Anshika Srivastava
Abhishek Pathak
Debashurti Das
Prajjval Pratap Singh
Audditiya Bandopadhyay
Niraj Rai
Gyaneshwer Chaubey
Source :
Frontiers in Genetics, Vol 11 (2020)
Publication Year :
2020
Publisher :
Frontiers Media S.A., 2020.

Abstract

Studies on host-pathogen interaction have identified human ACE2 as a host cell receptor responsible for mediating infection by coronavirus (Covid-19). Subsequent studies have shown striking difference of allele frequency among Europeans and Asians for a polymorphism rs2285666, present in ACE2. It has been revealed that the alternate allele (TT-plus strand or AA-minus strand) of rs2285666 elevate the expression level of this gene upto 50%, hence may play a significant role in SARS-CoV-2 susceptibility. Therefore, we have first looked the phylogenetic structure of rs2285666 derived haplotypes in worldwide populations and compared the spatial frequency of this particular allele with respect to the Covid-19 infection as well as case-fatality rate in India. For the first time, we ascertained a significant positive correlation for alternate allele (T or A) of rs2285666, with the lower infection as well as case-fatality ratio among Indian populations. We trust that this information will be useful to understand the role of ACE2 in Covid-19 susceptibility.

Details

Language :
English
ISSN :
16648021
Volume :
11
Database :
OpenAIRE
Journal :
Frontiers in Genetics
Accession number :
edsair.doi.dedup.....78595ac967fd33f9617a3a6dd59334fb
Full Text :
https://doi.org/10.3389/fgene.2020.564741/full