Back to Search
Start Over
Genetic diversity of Lepista nuda (Agaricales, Basidiomycota) in Northeast China as indicated by SRAP and ISSR markers
- Source :
- PLoS ONE, Vol 13, Iss 8, p e0202761 (2018)
- Publication Year :
- 2018
- Publisher :
- Public Library of Science (PLoS), 2018.
-
Abstract
- Lepista nuda is a popular wild edible mushroom that grows in China. In this study, we used ISSR and SRAP molecular markers to analyze the genetic diversity of 72 samples of L. nuda from eight populations in Northeast China. In total, six ISSR primers and five pairs of SRAP primers that produced clear and polymorphic banding profiles were selected for assessing L. nuda genetic diversity. The results revealed a high level of genetic variation among the 72 samples (94.4% polymorphism) but a low degree of gene flow among the populations. Among L. nuda populations, genetic distance was not correlated significantly with geographic distance. The antioxidant activity of the samples from each population was also tested and the result showed that all the selected samples had more than 60% DPPH scavenging activities. Nonetheless, the antioxidant activity diversity is not coincident with both the genetic diversity and the geographic distribution. The results indicate that ISSR and SRAP molecular markers are useful for studying the genetic diversity of L. nuda. The results also suggest that L. nuda populations in Northeast China require protection.
- Subjects :
- 0301 basic medicine
China
Lepista
Climate
030106 microbiology
Population
lcsh:Medicine
Biology
Antioxidants
Gene flow
03 medical and health sciences
Genetic variation
Botany
Cluster Analysis
Agaricales
DNA, Fungal
education
lcsh:Science
Phylogeny
education.field_of_study
Genetic diversity
Polymorphism, Genetic
Multidisciplinary
lcsh:R
Fungal genetics
Genetic Variation
biology.organism_classification
030104 developmental biology
Genetic distance
lcsh:Q
Nucleic Acid Amplification Techniques
human activities
Microsatellite Repeats
Subjects
Details
- Language :
- English
- ISSN :
- 19326203
- Volume :
- 13
- Issue :
- 8
- Database :
- OpenAIRE
- Journal :
- PLoS ONE
- Accession number :
- edsair.doi.dedup.....77dcb2a9afd3be1b36a600193a0132d4