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Nanovirus-alphasatellite complex identified in Vicia cracca in the Rhône delta region of France
- Source :
- Archives of Virology, Archives of Virology, Springer Verlag, 2018, 163 (3), pp.695-700. ⟨10.1007/s00705-017-3634-4⟩
- Publication Year :
- 2018
- Publisher :
- HAL CCSD, 2018.
-
Abstract
- BGPI : équipe 2 / 7; International audience; Nanoviruses are multi-component plant-infecting single-stranded DNA viruses. Using a viral metagenomics-informed approach, a new nanovirus and two associated alphasatellite molecules have been identified in an uncultivated asymptomatic Vicia cracca plant in the Rhône region of France. This novel nanovirus genome includes eight genomic components (named DNA-R, DNA-S, DNA-M, DNA-C, DNA-N, DNA-U1, DNA-U2 and DNA-U4) and, across all components, shares < 66% pairwise sequence identity with other nanovirus genomes. The two associated alphasatellites share 62% identity with each other and < 81% identity will all other nanovirus-associated alphasatellites.
- Subjects :
- 0301 basic medicine
Delta
Identification
Vicia
Virologie
ADN
Genome
Nanoviruses
Vicia cracca
cow vetch
Phylogeny
Genetics
biology
General Medicine
3. Good health
Phylogeography
ssDNA virus
[SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology
[SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology
Nanoviridae
France
Reassortant Viruses
DNA, Single-Stranded
Alphavirus
Genome, Viral
génomique
03 medical and health sciences
Sequence Homology, Nucleic Acid
Virology
Alphasatellite
Plant Diseases
H20 - Maladies des plantes
Génome
Base Sequence
Nanovirus
Virus des végétaux
biology.organism_classification
Sequence identity
030104 developmental biology
DNA, Viral
Subjects
Details
- Language :
- English
- ISSN :
- 03048608 and 14328798
- Database :
- OpenAIRE
- Journal :
- Archives of Virology, Archives of Virology, Springer Verlag, 2018, 163 (3), pp.695-700. ⟨10.1007/s00705-017-3634-4⟩
- Accession number :
- edsair.doi.dedup.....76fa969e7ae90c8fd51992bf88e614ad
- Full Text :
- https://doi.org/10.1007/s00705-017-3634-4⟩