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Identification of SNP markers for population genetics studies of the Mediterranean gorgonian, Leptogorgia sarmentosa
- Source :
- Conservation Genetics Resources, Conservation Genetics Resources, Springer, 2021, pp.1-3. ⟨10.1007/s12686-021-01218-3⟩, Conservation Genetics Resources, 2021, pp.1-3. ⟨10.1007/s12686-021-01218-3⟩
- Publication Year :
- 2021
- Publisher :
- HAL CCSD, 2021.
-
Abstract
- International audience; A set of single nucleotide polymorphisms (SNP) was developed from the transcriptome of the gorgonian Leptogorgia sarmentosa. 21,491 putative SNPs were identified, and a selected set of 320 SNPs was tested using a MassARRAY System on 95 samples from the NW Mediterranean. A total of 153 SNPs were successfully genotyped and found to be polymorphic. The newly developed loci will be a valuable tool for population genetics studies of one of the most ubiquitous gorgonian species in the Mediterranean Sea.
- Subjects :
- [SDE] Environmental Sciences
0106 biological sciences
Mediterranean climate
MassARRAY
Leptogorgia sarmentosa
ved/biology.organism_classification_rank.species
gorgonian
Population genetics
Single-nucleotide polymorphism
010603 evolutionary biology
01 natural sciences
Transcriptome
03 medical and health sciences
Mediterranean sea
Single Nucleotide Polymorphism (SNP)
Genetics
SNP
14. Life underwater
Ecology, Evolution, Behavior and Systematics
030304 developmental biology
0303 health sciences
biology
ved/biology
biology.organism_classification
Gorgonian
[SDE]Environmental Sciences
Subjects
Details
- Language :
- English
- ISSN :
- 18777252 and 18777260
- Database :
- OpenAIRE
- Journal :
- Conservation Genetics Resources, Conservation Genetics Resources, Springer, 2021, pp.1-3. ⟨10.1007/s12686-021-01218-3⟩, Conservation Genetics Resources, 2021, pp.1-3. ⟨10.1007/s12686-021-01218-3⟩
- Accession number :
- edsair.doi.dedup.....75e4c4ea9618121b0dd4f359ca183952