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Transcriptome Analysis Reveals Potential Regulatory Genes Related to Heat Tolerance in Holstein Dairy Cattle
- Source :
- Genes, Volume 11, Issue 1, Genes, Vol 11, Iss 1, p 68 (2020)
- Publication Year :
- 2020
- Publisher :
- Multidisciplinary Digital Publishing Institute, 2020.
-
Abstract
- Heat stress affects the physiology and production performance of Chinese Holstein dairy cows. As such, the selection of heat tolerance in cows and elucidating its underlying mechanisms are vital to the dairy industry. This study aimed to investigate the heat tolerance associated genes and molecular mechanisms in Chinese Holstein dairy cows using a high-throughput sequencing approach and bioinformatics analysis. Heat-induced physiological indicators and milk yield changes were assessed to determine heat tolerance levels in Chinese Holstein dairy cows by Principal Component Analysis method following Membership Function Value Analysis. Results indicated that rectal temperature (RT), respiratory rate (RR), and decline in milk production were significantly lower (p &lt<br />0.05) in heat tolerant (HT) cows while plasma levels of heat shock protein (HSP: HSP70, HSP90), and cortisol were significantly higher (p &lt<br />0.05) when compared to non-heat tolerant (NHT) Chinese Holstein dairy cows. By applying RNA-Seq analysis, we identified 200 (81 down-regulated and 119 up-regulated) significantly (|log2fold change| &ge<br />1.4 and p &le<br />0.05) differentially expressed genes (DEGs) in HT versus NHT Chinese Holstein dairy cows. In addition, 14 of which were involved in protein&ndash<br />protein interaction (PPI) network. Importantly, several hub genes (OAS2, MX2, IFIT5 and TGFB2) were significantly enriched in immune effector process. These findings might be helpful to expedite the understanding for the mechanism of heat tolerance in Chinese Holstein dairy cows.
- Subjects :
- Thermotolerance
0301 basic medicine
China
Hot Temperature
lcsh:QH426-470
RNA-Seq
Biology
Heat Stress Disorders
Article
Immune effector process
Transcriptome
milk yield
03 medical and health sciences
Animal science
Heat shock protein
Genes, Regulator
Genetics
Animals
dairy cows
Heat-Shock Proteins
Genetics (clinical)
Dairy cattle
Regulator gene
Gene Expression Profiling
0402 animal and dairy science
High-Throughput Nucleotide Sequencing
food and beverages
hub genes
heat tolerance
04 agricultural and veterinary sciences
040201 dairy & animal science
Hsp90
Hsp70
Dairying
lcsh:Genetics
030104 developmental biology
biology.protein
Cattle
Heat-Shock Response
Subjects
Details
- Language :
- English
- ISSN :
- 20734425
- Database :
- OpenAIRE
- Journal :
- Genes
- Accession number :
- edsair.doi.dedup.....74cf2356b5843abae5ff1ef5e9ddf87e
- Full Text :
- https://doi.org/10.3390/genes11010068