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Modular organization of α-toxins from scorpion venom mirrors domain structure of their targets, sodium channels
- Source :
- Journal of Biological Chemistry
- Publication Year :
- 2013
- Publisher :
- American Society for Biochemistry and Molecular Biology, 2013.
-
Abstract
- To gain success in the evolutionary "arms race," venomous animals such as scorpions produce diverse neurotoxins selected to hit targets in the nervous system of prey. Scorpion α-toxins affect insect and/or mammalian voltage-gated sodium channels (Na(v)s) and thereby modify the excitability of muscle and nerve cells. Although more than 100 α-toxins are known and a number of them have been studied into detail, the molecular mechanism of their interaction with Na(v)s is still poorly understood. Here, we employ extensive molecular dynamics simulations and spatial mapping of hydrophobic/hydrophilic properties distributed over the molecular surface of α-toxins. It is revealed that despite the small size and relatively rigid structure, these toxins possess modular organization from structural, functional, and evolutionary perspectives. The more conserved and rigid "core module" is supplemented with the "specificity module" (SM) that is comparatively flexible and variable and determines the taxon (mammal versus insect) specificity of α-toxin activity. We further show that SMs in mammal toxins are more flexible and hydrophilic than in insect toxins. Concomitant sequence-based analysis of the extracellular loops of Na(v)s suggests that α-toxins recognize the channels using both modules. We propose that the core module binds to the voltage-sensing domain IV, whereas the more versatile SM interacts with the pore domain in repeat I of Na(v)s. These findings corroborate and expand the hypothesis on different functional epitopes of toxins that has been reported previously. In effect, we propose that the modular structure in toxins evolved to match the domain architecture of Na(v)s. ispartof: Journal of Biological Chemistry vol:288 issue:26 pages:19014-27 ispartof: location:United States status: published
- Subjects :
- animal structures
Architecture domain
Surface Properties
animal diseases
Protein domain
Molecular Sequence Data
Neurotoxins
Scorpion Venoms
Biology
Bioinformatics
Biochemistry
complex mixtures
Protein Structure, Secondary
Sodium Channels
Protein–protein interaction
03 medical and health sciences
Structure-Activity Relationship
Protein structure
parasitic diseases
Protein Interaction Mapping
Animals
Computer Simulation
Amino Acid Sequence
Molecular Biology
Peptide sequence
Ion channel
030304 developmental biology
0303 health sciences
Sequence Homology, Amino Acid
Sodium channel
030302 biochemistry & molecular biology
fungi
Computational Biology
Cell Biology
Recombinant Proteins
Protein Structure, Tertiary
Biophysics
Hydrophobic and Hydrophilic Interactions
Subjects
Details
- Language :
- English
- Database :
- OpenAIRE
- Journal :
- Journal of Biological Chemistry
- Accession number :
- edsair.doi.dedup.....747e4b522a9e6943281b325ac1439eac