Additional file 1 of Systematic identification of miRNA-regulatory networks unveils their potential roles in sugarcane response to Sorghum mosaic virus infection

Additional file 1: Figure S1. The targeting sites of the selected 12 miRNAs and their 15 target genes predicted by TargetFinder v1.6 software. When the score of miRNA that matches the mRNA is less than or equal to 3, the transcript sequence is considered as the miRNA target gene. Range represents the interval of mRNA used for alignment. Black lines indicate matched RNA base pairs, and two dots show a GU mismatch whereas none dot represents other types of mismatch. The gene ID follows the name of miRNAs and their target genes. Figure S2. The original image of PCR products of the three candidate sugarcane pre-miRNAs detected by electrophoresis. M, DNA marker 15,000 + 2,000 bp; 1, pre-nov_3741; 2, pre-nov_22650; and 3, pre_nov_40875.