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Four novel loci (19q13, 6q24, 12q24, and 5q14) influence the microcirculation In vivo
- Source :
- PLoS Genetics (print), 6(10). Public Library of Science, PLOS Genetics, 6(10). Public Library of Science, PLoS genetics, 6(10). Public Library of Science, PLoS Genetics, PLoS Genetics, Vol 6, Iss 10, p e1001184 (2010), PLoS Genet. 6:e1001184 (2010)
- Publication Year :
- 2010
- Publisher :
- Public Library of Science. The Journal's web site is located at http://www.plosgenetics.org, 2010.
-
Abstract
- There is increasing evidence that the microcirculation plays an important role in the pathogenesis of cardiovascular diseases. Changes in retinal vascular caliber reflect early microvascular disease and predict incident cardiovascular events. We performed a genome-wide association study to identify genetic variants associated with retinal vascular caliber. We analyzed data from four population-based discovery cohorts with 15,358 unrelated Caucasian individuals, who are members of the Cohort for Heart and Aging Research in Genomic Epidemiology (CHARGE) consortium, and replicated findings in four independent Caucasian cohorts (n = 6,652). All participants had retinal photography and retinal arteriolar and venular caliber measured from computer software. In the discovery cohorts, 179 single nucleotide polymorphisms (SNP) spread across five loci were significantly associated (p<br />Author Summary The microcirculation plays an important role in the development of cardiovascular diseases. Retinal vascular caliber changes reflect early microvascular disease and predict incident cardiovascular events. In order to identify genetic variants associated with retinal vascular caliber, we performed a genome-wide association study and analyzed data from four population-based discovery cohorts with 15,358 unrelated Caucasian individuals, who are members of the Cohort for Heart and Aging Research in Genomic Epidemiology (CHARGE) consortium, and replicated findings in four independent Caucasian cohorts (n = 6,652). We found evidence for association of four loci with retinal venular caliber: on chromosomes 19q13 within the RASIP1 locus, 6q24 adjacent to the VTA1 and NMBR loci, 12q24 in the region of ATXN2,SH2B3 and PTPN11 loci, and 5q14 adjacent to the MEF2C locus. In two independent samples, locus 12q24 was also associated with coronary heart disease and hypertension. In the present study, we demonstrate that four novel loci were associated with retinal venular caliber, an endophenotype of the microcirculation associated with clinical cardiovascular disease. Our findings will help focus research on novel genes and pathways involving the microcirculation and its role in the development of cardiovascular disease.
- Subjects :
- Male
Cancer Research
Pathology
VESSEL DIAMETERS
Genome-wide association study
030204 cardiovascular system & hematology
QH426-470
DISEASE
Pathogenesis
Cohort Studies
chemistry.chemical_compound
0302 clinical medicine
Cardiovascular Disorders/Vascular Biology
Child
Genetics (clinical)
Genetics
Aged, 80 and over
0303 health sciences
education.field_of_study
Middle Aged
314 Health sciences
3. Good health
Cardiovascular Diseases
Child, Preschool
Chromosomes, Human, Pair 5
Chromosomes, Human, Pair 6
Female
Research Article
Adult
medicine.medical_specialty
Adolescent
ANTIHYPERTENSIVE DRUG THERAPIES
Population
European Continental Ancestry Group
Locus (genetics)
Single-nucleotide polymorphism
ATHEROSCLEROSIS RISK
Biology
Polymorphism, Single Nucleotide
White People
Microcirculation
03 medical and health sciences
Young Adult
AGE
Meta-Analysis as Topic
SDG 3 - Good Health and Well-being
Genetics and Genomics/Population Genetics
medicine
SNP
Humans
GENOME-WIDE ASSOCIATION
education
Molecular Biology
Ecology, Evolution, Behavior and Systematics
METAANALYSIS
Global BPgen Consortium
030304 developmental biology
Aged
0604 Genetics
Chromosomes, Human, Pair 12
Retinal Vessels
Retinal
CHARGE CONSORTIUM
RETINAL VASCULAR CALIBER
chemistry
Genetic Loci
Ophthalmology/Retinal Disorders
genome-wide association study
microcirculation
GENE/ENVIRONMENT SUSCEPTIBILITY-REYKJAVIK
Chromosomes, Human, Pair 19
Developmental Biology
Genome-Wide Association Study
Subjects
Details
- Language :
- English
- ISSN :
- 15537390
- Database :
- OpenAIRE
- Journal :
- PLoS Genetics (print), 6(10). Public Library of Science, PLOS Genetics, 6(10). Public Library of Science, PLoS genetics, 6(10). Public Library of Science, PLoS Genetics, PLoS Genetics, Vol 6, Iss 10, p e1001184 (2010), PLoS Genet. 6:e1001184 (2010)
- Accession number :
- edsair.doi.dedup.....7358a58ef20d2f442c9d2f1082f2f0aa