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The Genomic Impact of European Colonization of the Americas

Authors :
Alessandro Raveane
Shahlo Turdikulova
Donata Luiselli
Pongsakorn Wangkumhang
Marta E. Alarcón-Riquelme
Francesco Montinaro
Guido Alberto Gnecchi-Ruscone
Damir Marjanović
Mait Metspalu
Sarabjit S. Mastana
Oleg Balanovsky
Alessandro Achilli
Antonio Torroni
Lejla Kovacevic
L. A. Atramentova
Anna Olivieri
Maria Fernanda Lima-Costa
Linda Ongaro
Cristian Capelli
Toomas Kivisild
Bernardo L. Horta
Nédio Mabunda
Marilia O. Scliar
Roy J. King
Etienne Patin
Kristiina Tambets
Garrett Hellenthal
Mauricio Lima Barreto
Celia A. May
Miguel Gonzalez-Santos
Andreja Leskovac
Andrés Moreno-Estrada
Eduardo Tarazona-Santos
Alexandre C. Pereira
Rodrigo Flores
Anastasia Kouvatsi
Luca Pagani
Stefania Sarno
Elena Balanovska
Ornella Semino
Davide Marnetto
Ongaro L.
Scliar M.O.
Flores R.
Raveane A.
Marnetto D.
Sarno S.
Gnecchi-Ruscone G.A.
Alarcon-Riquelme M.E.
Patin E.
Wangkumhang P.
Hellenthal G.
Gonzalez-Santos M.
King R.J.
Kouvatsi A.
Balanovsky O.
Balanovska E.
Atramentova L.
Turdikulova S.
Mastana S.
Marjanovic D.
Mulahasanovic L.
Leskovac A.
Lima-Costa M.F.
Pereira A.C.
Barreto M.L.
Horta B.L.
Mabunda N.
May C.A.
Moreno-Estrada A.
Achilli A.
Olivieri A.
Semino O.
Tambets K.
Kivisild T.
Luiselli D.
Torroni A.
Capelli C.
Tarazona-Santos E.
Metspalu M.
Pagani L.
Montinaro F.
Institute of Genomics [Tartu, Estonia]
University of Tartu
Universidade de São Paulo = University of São Paulo (USP)
Dipartimento di Biologia e Biotecnologie 'Lazzaro Spallanzani' = Department of Biology and Biotechnology [Univ di Pavia] (DBB UNIPV)
Università degli Studi di Pavia = University of Pavia (UNIPV)
Alma Mater Studiorum Università di Bologna [Bologna] (UNIBO)
Max Planck Institute for the Science of Human History (MPI-SHH)
Max-Planck-Gesellschaft
Centre for Genomics and Oncological Reearch (GENYO)
Génétique Evolutive Humaine - Human Evolutionary Genetics
Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS)
University College of London [London] (UCL)
University of Oxford
Stanford University School of Medicine [CA, USA]
Aristotle University of Thessaloniki
Vavilov Institute of General Genetics
Russian Academy of Sciences [Moscow] (RAS)
V.N. Karazin Kharkiv National University (KhNU)
Institute of Bioorganic Chemistry [Tashkent, Uzbekistan]
Academy of Sciences of Republic of Uzbekistan
Loughborough University
International Burch University [Sarajevo]
University of Belgrade [Belgrade]
Fundação Oswaldo Cruz / Oswaldo Cruz Foundation (FIOCRUZ)
Réseau International des Instituts Pasteur (RIIP)
Universidade Federal da Bahia (UFBA)
Universidade Federal de Pelotas = Federal University of Pelotas (UFPel)
Instituto Nacional de Saude [Maputo, Mozambique] (INS)
University of Leicester
National Laboratory of Genomics for Biodiversity (LANGEBIO)
Centro de Investigacion y de Estudios Avanzados del Instituto Politécnico Nacional (CINVESTAV)
Dipartimento di Biologia e Biotecnologie 'L. Spallanzani'
Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven)
University of Bologna/Università di Bologna
Universidade Federal de Minas Gerais [Belo Horizonte] (UFMG)
University of São Paulo (USP)
Dipartimento di Biologia e Biotecnologie ‘Lazzaro Spallanzani’, University of Pavia
University of Pavia
BIGEA, Department of Biological, Geological and Environmental Sciences, Alma Mater Studiorum – University of Bologna, Bologna, Italy
Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS)
University of Oxford [Oxford]
Fundação Oswaldo Cruz (FIOCRUZ)
Universidade de São Paulo (USP)
University of Bologna
Source :
Current Biology, Current Biology-CB, Current Biology-CB, 2019, 29 (23), pp.3974-3986.e4. ⟨10.1016/j.cub.2019.09.076⟩, Current Biology-CB, Elsevier, 2019, 29 (23), pp.3974-3986.e4. ⟨10.1016/j.cub.2019.09.076⟩
Publication Year :
2019

Abstract

The complexity of the admixture dynamics that shaped American populations is unveiled by Ongaro et al., where genetic data for more than 12,000 individuals from the continents are investigated. This study evaluates the dramatic impact of events after the colonial era, revealing a spatial and temporal heterogeneity and mirroring historical records. © 2019 Elsevier Ltd The human genetic diversity of the Americas has been affected by several events of gene flow that have continued since the colonial era and the Atlantic slave trade. Moreover, multiple waves of migration followed by local admixture occurred in the last two centuries, the impact of which has been largely unexplored. Here, we compiled a genome-wide dataset of ∼12,000 individuals from twelve American countries and ∼6,000 individuals from worldwide populations and applied haplotype-based methods to investigate how historical movements from outside the New World affected (1) the genetic structure, (2) the admixture profile, (3) the demographic history, and (4) sex-biased gene-flow dynamics of the Americas. We revealed a high degree of complexity underlying the genetic contribution of European and African populations in North and South America, from both geographic and temporal perspectives, identifying previously unreported sources related to Italy, the Middle East, and to specific regions of Africa. © 2019 Elsevier Ltd Preprint version of the article: "The genomic impact of European colonization of the Americas", posted June 28, 2019 on bioRxiv. Article is now published in Current Biology doi: [dx.doi.org/10.1016/j.cub.2019.09.076]. Published version on this repository: [http://vinar.vin.bg.ac.rs/handle/123456789/8654].

Details

Language :
English
ISSN :
09609822 and 18790445
Database :
OpenAIRE
Journal :
Current Biology, Current Biology-CB, Current Biology-CB, 2019, 29 (23), pp.3974-3986.e4. ⟨10.1016/j.cub.2019.09.076⟩, Current Biology-CB, Elsevier, 2019, 29 (23), pp.3974-3986.e4. ⟨10.1016/j.cub.2019.09.076⟩
Accession number :
edsair.doi.dedup.....7305870a47c570d1863fdacb68c22310
Full Text :
https://doi.org/10.1016/j.cub.2019.09.076⟩