Back to Search
Start Over
Mutation Detection in Patients with Retinal Dystrophies Using Targeted Next Generation Sequencing
- Source :
- PLoS ONE, PLoS ONE, Vol 11, Iss 1, p e0145951 (2016), PLoS ONE, Public Library of Science, 2016, 11 (1), pp.e0145951. ⟨10.1371/journal.pone.0145951⟩, PLoS ONE 11:e0145951 (2016)
- Publication Year :
- 2016
- Publisher :
- Public Library of Science, 2016.
-
Abstract
- International audience; Retinal dystrophies (RD) constitute a group of blinding diseases that are characterized by clinical variability and pronounced genetic heterogeneity. The different nonsyndromic and syndromic forms of RD can be attributed to mutations in more than 200 genes. Consequently, next generation sequencing (NGS) technologies are among the most promising approaches to identify mutations in RD. We screened a large cohort of patients comprising 89 independent cases and families with various subforms of RD applying different NGS platforms. While mutation screening in 50 cases was performed using a RD gene capture panel, 47 cases were analyzed using whole exome sequencing. One family was analyzed using whole genome sequencing. A detection rate of 61% was achieved including mutations in 34 known and two novel RD genes. A total of 69 distinct mutations were identified, including 39 novel mutations. Notably, genetic findings in several families were not consistent with the initial clinical diagnosis. Clinical reassessment resulted in refinement of the clinical diagnosis in some of these families and confirmed the broad clinical spectrum associated with mutations in RD genes.
- Subjects :
- 0301 basic medicine
Male
Mutation rate
DNA Copy Number Variations
lcsh:Medicine
Biology
medicine.disease_cause
Frameshift mutation
03 medical and health sciences
Genetic Heterogeneity
Mutation Rate
ddc:570
Retinal Dystrophies
medicine
Humans
Exome
Genetic Predisposition to Disease
lcsh:Science
Eye Proteins
Exome sequencing
Genetic Association Studies
Whole genome sequencing
Genetics
Mutation
Multidisciplinary
Genetic heterogeneity
lcsh:R
High-Throughput Nucleotide Sequencing
3. Good health
Pedigree
030104 developmental biology
Phenotype
lcsh:Q
Female
[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology
Genetic screen
Research Article
Subjects
Details
- Language :
- English
- ISSN :
- 19326203
- Volume :
- 11
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- PLoS ONE
- Accession number :
- edsair.doi.dedup.....72c1d9a41aba502697d031fab72fdbf1