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Investigation on the Interaction of Dabrafenib with Human Serum Albumin Using Combined Experiment and Molecular Dynamics Simulation: Exploring the Binding Mechanism, Esterase-like Activity, and Antioxidant Activity
- Source :
- Molecular Pharmaceutics. 15:5637-5645
- Publication Year :
- 2018
- Publisher :
- American Chemical Society (ACS), 2018.
-
Abstract
- Dabrafenib is a novel targeted antimelanoma drug. The present work explored the binding mechanism of dabrafenib-human serum albumin (HSA) and the effect on the esterase-like activity and antioxidant activity of HSA by using 19F NMR, spectroscopy methods, and molecular dynamics simulation. The results of 19F NMR, fluorescence, and time-resolved fluorescence spectroscopy revealed that dabrafenib spontaneously binds to the subdomain IIIA of the HSA by hydrophobic action and forms a static complex. The binding affects the esterase-like activity of HSA but not its antioxidant activity. According to the results of molecular dynamics simulation, dabrafenib interacts with Arg410 and Tyr411, which are the key residue associated with the esterase-like activity of HSA. Meanwhile, dabrafenib does not interact with Cys34, the key residue associated with the antioxidant activity of HSA. The results of circular dichroism spectroscopy and molecular dynamics simulation show that the conformation of HSA is not affected by the binding of dabrafenib. This study can provide useful information for understanding the pharmacokinetic properties of dabrafenib.
- Subjects :
- 0301 basic medicine
Circular dichroism
Serum albumin
Pharmaceutical Science
Antineoplastic Agents
Serum Albumin, Human
02 engineering and technology
Fluorine-19 NMR
Molecular Dynamics Simulation
Fluorescence spectroscopy
03 medical and health sciences
Molecular dynamics
Residue (chemistry)
Oximes
Drug Discovery
medicine
Cysteine
Binding Sites
biology
Chemistry
Circular Dichroism
Esterases
Imidazoles
Dabrafenib
021001 nanoscience & nanotechnology
Human serum albumin
body regions
Spectrometry, Fluorescence
030104 developmental biology
embryonic structures
biology.protein
Biophysics
Molecular Medicine
0210 nano-technology
Hydrophobic and Hydrophilic Interactions
Protein Binding
medicine.drug
Subjects
Details
- ISSN :
- 15438392 and 15438384
- Volume :
- 15
- Database :
- OpenAIRE
- Journal :
- Molecular Pharmaceutics
- Accession number :
- edsair.doi.dedup.....713f4bcde79ae884f90678ce6aea6ea1
- Full Text :
- https://doi.org/10.1021/acs.molpharmaceut.8b00806