Back to Search
Start Over
ARIAweb: a server for automated NMR structure calculation
- Source :
- Nucleic Acids Research, Nucleic Acids Research, 2020, ⟨10.1093/nar/gkaa362⟩, Nucleic Acids Research, Oxford University Press, 2020, ⟨10.1093/nar/gkaa362⟩
- Publication Year :
- 2020
- Publisher :
- Oxford University Press (OUP), 2020.
-
Abstract
- Nuclear magnetic resonance (NMR) spectroscopy is a method of choice to study the dynamics and determine the atomic structure of macromolecules in solution. The standalone program ARIA (Ambiguous Restraints for Iterative Assignment) for automated assignment of nuclear Overhauser enhancement (NOE) data and structure calculation is well established in the NMR community. To ultimately provide a perfectly transparent and easy to use service, we designed an online user interface to ARIA with additional functionalities. Data conversion, structure calculation setup and execution, followed by interactive visualization of the generated 3D structures are all integrated in ARIAweb and freely accessible at https://ariaweb.pasteur.fr.
- Subjects :
- Models, Molecular
AcademicSubjects/SCI00010
Biology
010402 general chemistry
01 natural sciences
Data conversion
Computational science
Mice
03 medical and health sciences
Genetics
Animals
Humans
Nuclear Magnetic Resonance, Biomolecular
Interactive visualization
030304 developmental biology
Structure (mathematical logic)
0303 health sciences
Proteins
computer.file_format
Standalone program
0104 chemical sciences
[SDV.BBM.BP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biophysics
Web Server Issue
RNA
Spectrum analysis
User interface
computer
Software
Subjects
Details
- ISSN :
- 13624962 and 03051048
- Volume :
- 48
- Database :
- OpenAIRE
- Journal :
- Nucleic Acids Research
- Accession number :
- edsair.doi.dedup.....6f83e2b4bb84b27e6f1d25c44343ebba