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A new molecular classification to drive precision treatment strategies in primary Sjögren's syndrome
- Source :
- Digital.CSIC. Repositorio Institucional del CSIC, instname, Nature Communications, Nature Communications, Nature Publishing Group, 2021, 12 (1), pp.3523. ⟨10.1038/s41467-021-23472-7⟩, Nature Communications, Vol 12, Iss 1, Pp 1-18 (2021), Dipòsit Digital de la UB, Universidad de Barcelona
- Publication Year :
- 2021
- Publisher :
- Nature Publishing Group, 2021.
-
Abstract
- There is currently no approved treatment for primary Sjögren’s syndrome, a disease that primarily affects adult women. The difficulty in developing effective therapies is -in part- because of the heterogeneity in the clinical manifestation and pathophysiology of the disease. Finding common molecular signatures among patient subgroups could improve our understanding of disease etiology, and facilitate the development of targeted therapeutics. Here, we report, in a cross-sectional cohort, a molecular classification scheme for Sjögren’s syndrome patients based on the multi-omic profiling of whole blood samples from a European cohort of over 300 patients, and a similar number of age and gender-matched healthy volunteers. Using transcriptomic, genomic, epigenetic, cytokine expression and flow cytometry data, combined with clinical parameters, we identify four groups of patients with distinct patterns of immune dysregulation. The biomarkers we identify can be used by machine learning classifiers to sort future patients into subgroups, allowing the re-evaluation of response to treatments in clinical trials.<br />Sjögren’s syndrome, a disease that primarily affects women, is poorly understood. Here, the authors combine data from a large cohort of patients and healthy controls to identify biomarkers that distinguish patient subgroups to improve our understanding of the disease and facilitate drug development.
- Subjects :
- Male
Oncology
MESH: Inflammation
MESH: Flow Cytometry
Disease
DISEASE
0302 clinical medicine
Molecular classification
Databases, Genetic
MESH: Interferons
Databases, Protein
MESH: Cytokines
MESH: Middle Aged
Molecular medicine
Malalties autoimmunitàries
MESH: Polymorphism, Single Nucleotide
ASSOCIATION
Flow Cytometry
Pathophysiology
3. Good health
Multigene Family
Marcadors bioquímics
Cohort
Cytokines
Science & Technology - Other Topics
Epigenetics
cell cycle
MESH: Computational Biology
medicine.medical_specialty
Science
Article
General Biochemistry, Genetics and Molecular Biology
03 medical and health sciences
splicing
MESH: Cross-Sectional Studies
Rheumatology
MESH: Computer Simulation
Humans
Computer Simulation
RITUXIMAB
SIGNATURES
Autoantibodies
Science & Technology
MESH: Humans
MESH: Transcriptome
Computational Biology
MESH: Adult
DNA Methylation
Immune dysregulation
Epigenètica
Clinical trial
CLINICAL PHENOTYPES
Cross-Sectional Studies
030104 developmental biology
MESH: Sjogren's Syndrome
MESH: Genome-Wide Association Study
chronic lymphocytic leukemia
MESH: Multigene Family
MESH: Female
Biomarkers
RESPONSES
0301 basic medicine
Proteome
Autoimmune diseases
General Physics and Astronomy
medicine.disease_cause
Cohort Studies
Clinical trials
MESH: DNA Methylation
MESH: Autoantibodies
RNA-Seq
liquid chromatography-tandem mass spectrometry
MESH: Cohort Studies
MESH: Databases, Genetic
Multidisciplinary
Biochemical markers
Middle Aged
MESH: Chemokines
Multidisciplinary Sciences
MESH: Proteome
Sjogren's Syndrome
Assaigs clinics
[SDV.IMM]Life Sciences [q-bio]/Immunology
Female
Chemokines
HYDROXYCHLOROQUINE
Adult
INTERFERON
MESH: Databases, Protein
MEDLINE
Polymorphism, Single Nucleotide
MECHANISMS
Internal medicine
cell cycle, chronic lymphocytic leukemia, liquid chromatography-tandem mass spectrometry, splicing
medicine
MESH: RNA-Seq
Inflammation
030203 arthritis & rheumatology
business.industry
General Chemistry
EFFICACY
MESH: Male
MESH: Biomarkers
Interferons
Transcriptome
business
Assaigs clínics
Genome-Wide Association Study
Subjects
Details
- ISSN :
- 20411723
- Database :
- OpenAIRE
- Journal :
- Digital.CSIC. Repositorio Institucional del CSIC, instname, Nature Communications, Nature Communications, Nature Publishing Group, 2021, 12 (1), pp.3523. ⟨10.1038/s41467-021-23472-7⟩, Nature Communications, Vol 12, Iss 1, Pp 1-18 (2021), Dipòsit Digital de la UB, Universidad de Barcelona
- Accession number :
- edsair.doi.dedup.....6f5182e71983a3c820bc2eed151f2178