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Transcriptome profiling of equine vitamin E deficient neuroaxonal dystrophy identifies upregulation of liver X receptor target genes
- Source :
- Finno, CJ; Bordbari, MH; Valberg, SJ; Lee, D; Herron, J; Hines, K; et al.(2016). Transcriptome profiling of equine vitamin E deficient neuroaxonal dystrophy identifies upregulation of liver X receptor target genes. Free Radical Biology and Medicine, 101, 261-271. doi: 10.1016/j.freeradbiomed.2016.10.009. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/6p84064t
- Publication Year :
- 2016
- Publisher :
- Elsevier BV, 2016.
-
Abstract
- © 2016 Elsevier Inc. Specific spontaneous heritable neurodegenerative diseases have been associated with lower serum and cerebrospinal fluid α-tocopherol (α-TOH) concentrations. Equine neuroaxonal dystrophy (eNAD) has similar histologic lesions to human ataxia with vitamin E deficiency caused by mutations in the α-TOH transfer protein gene (TTPA). Mutations in TTPA are not present with eNAD and the molecular basis remains unknown. Given the neuropathologic phenotypic similarity of the conditions, we assessed the molecular basis of eNAD by global transcriptome sequencing of the cervical spinal cord. Differential gene expression analysis identified 157 significantly (FDR
- Subjects :
- Male
0301 basic medicine
Apolipoprotein E
Transcription, Genetic
Ionotropic Glutamate
Messenger
Neurodegenerative
Medical Biochemistry and Metabolomics
Receptors, Metabotropic Glutamate
Biochemistry
Transcriptome
Receptors
Protein Interaction Mapping
Metabotropic Glutamate
Vitamin E
2.1 Biological and endogenous factors
Vitamin E Deficiency
Aetiology
Phospholipid Transfer Proteins
Cholesterol 7-alpha-Hydroxylase
Liver X Receptors
Regulation of gene expression
Medulla Oblongata
Cholesterol
Spinal Cord
Neurological
Female
lipids (amino acids, peptides, and proteins)
Transcription
ATP Binding Cassette Transporter 1
Signal Transduction
Biochemistry & Molecular Biology
medicine.medical_specialty
RNA-sequencing
Neuroaxonal Dystrophies
Biology
Retinoid X receptor
Receptors, Ionotropic Glutamate
Cholesterol 7 alpha-hydroxylase
Article
Medicinal and Biomolecular Chemistry
03 medical and health sciences
Apolipoproteins E
Genetic
Downregulation and upregulation
Physiology (medical)
Internal medicine
Genetics
medicine
Animals
Horses
RNA, Messenger
Liver X receptor
Nutrition
Gene Expression Profiling
Neurosciences
Molecular Sequence Annotation
Brain Disorders
Gene expression profiling
Gene Ontology
030104 developmental biology
Endocrinology
Gene Expression Regulation
Mutation
RNA
Biochemistry and Cell Biology
Carrier Proteins
Subjects
Details
- ISSN :
- 08915849
- Volume :
- 101
- Database :
- OpenAIRE
- Journal :
- Free Radical Biology and Medicine
- Accession number :
- edsair.doi.dedup.....6ebf0f0f4caa84ae31e3a06e49caa092
- Full Text :
- https://doi.org/10.1016/j.freeradbiomed.2016.10.009