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Insights into the homo-oligomerization properties of N-terminal coiled-coil domain of Ebola virus VP35 protein
- Source :
- Virus Research. 247:61-70
- Publication Year :
- 2018
- Publisher :
- Elsevier BV, 2018.
-
Abstract
- The multifunctional Ebola virus (EBOV) VP35 protein is a key determinant of virulence. VP35 is essential for EBOV replication, is a component of the viral RNA polymerase and participates in nucleocapsid formation. Furthermore, VP35 contributes to EBOV evasion of the host innate immune response by suppressing RNA silencing and blocking RIG-I like receptors' pathways that lead to type I interferon (IFN) production. VP35 homo-oligomerization has been reported to be critical for its replicative function and to increase its IFN-antagonism properties. Moreover, homo-oligomerization is mediated by a predicted coiled-coil (CC) domain located within its N-terminal region. Here we report the homo-oligomerization profile of full-length recombinant EBOV VP35 (rVP35) assessed by size-exclusion chromatography and native polyacrylamide gel electrophoresis. Based on our biochemical results and in agreement with previous experimental observations, we have built an in silico 3D model of the so-far structurally unsolved EBOV VP35 CC domain and performed self-assembly homo-oligomerization simulations by means of molecular dynamics. Our model advances the understanding of how VP35 may associate in different homo-oligomeric species, a crucial process for EBOV replication and pathogenicity.
- Subjects :
- Protein Conformation, alpha-Helical
0301 basic medicine
Cancer Research
Virulence Factors
In silico
Genetic Vectors
Gene Expression
Molecular Dynamics Simulation
medicine.disease_cause
03 medical and health sciences
Interferon
Virology
Gene expression
Escherichia coli
medicine
Protein Interaction Domains and Motifs
Amino Acid Sequence
Cloning, Molecular
Polymerase
Ebolavirus
Binding Sites
Ebola virus
biology
Viral Core Proteins
Nucleocapsid Proteins
Recombinant Proteins
Cell biology
Nucleoprotein
RNA silencing
Nucleoproteins
030104 developmental biology
Infectious Diseases
Structural Homology, Protein
biology.protein
Thermodynamics
Protein Multimerization
Sequence Alignment
Protein Binding
medicine.drug
Subjects
Details
- ISSN :
- 01681702
- Volume :
- 247
- Database :
- OpenAIRE
- Journal :
- Virus Research
- Accession number :
- edsair.doi.dedup.....6df7416c98a55a9a92806151006a9953
- Full Text :
- https://doi.org/10.1016/j.virusres.2018.02.003