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Point-of-Care System for HTLV-1 Proviral Load Quantification by Digital Mediator Displacement LAMP

Authors :
Friedrich Zitz
Hans Nitschko
Mohammed A. Bakheit
Karl Stock
Florian Hausladen
Dominik Drossart
Nils Paust
Giampiero Porro
Oliver Strohmeier
Roland Zengerle
Felix von Stetten
Nadine Borst
Hannes Hofer
Silvina Stinco
Mark Keller
Holger Wurm
Lisa Becherer
Dominik Huber
Simon Wadle
Sieghard Frischmann
Hanna Kuhn
Jacob Friedrich Hess
Tobias Hutzenlaub
Source :
Micromachines, Volume 12, Issue 2, Micromachines, Vol 12, Iss 159, p 159 (2021)
Publication Year :
2021
Publisher :
MDPI AG, 2021.

Abstract

This paper presents a universal point-of-care system for fully automated quantification of human T-cell lymphotropic virus type 1 (HTLV-1) proviral load, including genomic RNA, based on digital reverse RNA transcription and c-DNA amplification by MD LAMP (mediator displacement loop-mediated isothermal amplification). A disposable microfluidic LabDisk with pre-stored reagents performs automated nucleic acid extraction, reaction setup, emulsification, reverse transcription, digital DNA amplification, and quantitative fluorogenic endpoint detection with universal reporter molecules. Automated nucleic acid extraction from a suspension of HTLV-1-infected CD4+ T-lymphocytes (MT-2 cells) yielded 8 ± 7 viral nucleic acid copies per MT-2 cell, very similar to the manual reference extraction (7 ± 2 nucleic acid copies). Fully automated sample processing from whole blood spiked with MT-2 cells showed a comparable result of 7 ± 3 copies per MT-2 cell after a run time of two hours and 10 min.

Details

ISSN :
2072666X
Volume :
12
Database :
OpenAIRE
Journal :
Micromachines
Accession number :
edsair.doi.dedup.....6ccf0ec184a557b3045131689c5c6b80
Full Text :
https://doi.org/10.3390/mi12020159