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Comment on 'Flexibility of short DNA helices with finite-length effect: From base pairs to tens of base pairs' [J. Chem. Phys. 142, 125103 (2015)]

Authors :
Enrico Skoruppa
Jan A. Stevens
Aderik Voorspoels
Enrico Carlon
Merijn Vangilbergen
Midas Segers
Source :
The Journal of chemical physics. 155(2)
Publication Year :
2021

Abstract

While analyzing the persistence length of DNA atomistic simulations Wu et al. [J. Chem. Phys. 142, 125103 (2015)] introduced an empirical formula to account for the observed length-dependence. In particular they found that the persistence length increases with the distance. Here, we derive the formula by Wu et al. using a non-local twistable wormlike chain which introduces couplings between distal sites. Finally, we show that the same formula can account for the length-scale dependence of the torsional persistence length and is, in fact, applicable to any kind of polymer model with non-local couplings.

Details

ISSN :
10897690
Volume :
155
Issue :
2
Database :
OpenAIRE
Journal :
The Journal of chemical physics
Accession number :
edsair.doi.dedup.....6c8b1b18fb876ced9b82d123cf526cdf