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Homology model, molecular dynamics simulation and novel pyrazole analogs design of Candida albicans CYP450 lanosterol 14 α-demethylase, a target enzyme for antifungal therapy
- Source :
- Journal of Biomolecular Structure and Dynamics. 35:1446-1463
- Publication Year :
- 2016
- Publisher :
- Informa UK Limited, 2016.
-
Abstract
- Candida albicans infections and their resistance to clinically approved azole drugs are major concerns for human. The azole antifungal drugs inhibit the ergosterol synthesis by targeting lanosterol 14α-demethylase of cytochrome P450 family. The lack of high-resolution structural information of fungal pathogens has been a barrier for the design of modified azole drugs. Thus, a preliminary theoretical molecular dynamic study is carried out to develop and validate a simple homologous model using crystallographic structure of the lanosterol 14α-demethylase of Mycobacterium tuberculosis (PDB ID-1EA1) in which the active site residues are substituted with that of C. albicans (taxid 5476). Further, novel designed pyrazole analogs (SGS1-16) docked on chimeric 1EA1 and revealed that SGS-16 show good binding affinity through non-bonding interaction with the heme, which is different from the leading azole antifungals. The ADME-T results showed these analogs can be further explored in design of more safe and effective antifungal agents.
- Subjects :
- Protein Conformation, alpha-Helical
0301 basic medicine
030103 biophysics
Antifungal Agents
Stereochemistry
Recombinant Fusion Proteins
Gene Expression
Molecular Dynamics Simulation
Crystallography, X-Ray
Fungal Proteins
Sterol 14-Demethylase
03 medical and health sciences
chemistry.chemical_compound
Bacterial Proteins
Structural Biology
Catalytic Domain
Candida albicans
Protein Interaction Domains and Motifs
Amino Acid Sequence
Homology modeling
Molecular Biology
14-alpha Demethylase Inhibitors
chemistry.chemical_classification
Fungal protein
biology
Lanosterol
Mycobacterium tuberculosis
General Medicine
biology.organism_classification
Corpus albicans
Molecular Docking Simulation
030104 developmental biology
chemistry
Biochemistry
Structural Homology, Protein
Pyrazoles
Thermodynamics
Azole
Protein Conformation, beta-Strand
Sequence Alignment
Protein Binding
Subjects
Details
- ISSN :
- 15380254 and 07391102
- Volume :
- 35
- Database :
- OpenAIRE
- Journal :
- Journal of Biomolecular Structure and Dynamics
- Accession number :
- edsair.doi.dedup.....6c7df752812c721bd0d217c26ed5a2b4
- Full Text :
- https://doi.org/10.1080/07391102.2016.1185380