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Trajectory optimized NUFFT: Faster nonāCartesian MRI reconstruction through prior knowledge and parallel architectures
- Source :
- Magnetic Resonance in Medicine. 81:2064-2071
- Publication Year :
- 2018
- Publisher :
- Wiley, 2018.
-
Abstract
- Purpose The non-uniform fast Fourier transform (NUFFT) involves interpolation of non-uniformly sampled Fourier data onto a Cartesian grid, an interpolation that is slowed by complex, non-local data access patterns. A faster NUFFT would increase the clinical relevance of the plethora of advanced non-Cartesian acquisition methods. Methods Here we customize the NUFFT procedure for a radial trajectory and GPU architecture to eliminate the bottlenecks encountered when allowing for arbitrary trajectories and hardware. We call the result TRON, for TRajectory Optimized NUFFT. We benchmark the speed and accuracy TRON on a Shepp-Logan phantom and on whole-body continuous golden-angle radial MRI. Results TRON was 6-30× faster than the closest competitor, depending on test data set, and was the most accurate code tested. Conclusions Specialization of the NUFFT algorithm for a particular trajectory yielded significant speed gains. TRON can be easily extended to other trajectories, such as spiral and PROPELLER. TRON can be downloaded at http://github.com/davidssmith/TRON.
- Subjects :
- Male
Computer science
Fast Fourier transform
Article
030218 nuclear medicine & medical imaging
Regular grid
law.invention
03 medical and health sciences
symbols.namesake
Esophagus
0302 clinical medicine
law
Image Processing, Computer-Assisted
Humans
Whole Body Imaging
Radiology, Nuclear Medicine and imaging
Cartesian coordinate system
Mouth
Fourier Analysis
Phantoms, Imaging
Reproducibility of Results
Optic Nerve
Radial trajectory
Magnetic Resonance Imaging
Deglutition
Hypopharynx
Fourier transform
Trajectory
Benchmark (computing)
symbols
Programming Languages
Algorithm
Algorithms
Software
030217 neurology & neurosurgery
Interpolation
Subjects
Details
- ISSN :
- 15222594 and 07403194
- Volume :
- 81
- Database :
- OpenAIRE
- Journal :
- Magnetic Resonance in Medicine
- Accession number :
- edsair.doi.dedup.....6bc248637cba1750dba059707a178531