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Characterization of the complete chloroplast genome of a Peruvian landrace of Capsicum chinense Jacq. (Solanaceae), arnaucho chili pepper

Authors :
Carlos I. Arbizu
Carla L. Saldaña
Rubén D. Ferro-Mauricio
Julio C. Chávez-Galarza
Jordan Herrera
Sergio Contreras-Liza
Juan C. Guerrero-Abad
Jorge L. Maicelo
Source :
Mitochondrial DNA. Part B, Resources, article-version (VoR) Version of Record, Instituto Nacional de Innovación Agraria, INIA-Institucional, instacron:INIA, Repositorio Institucional-INIA
Publication Year :
2022
Publisher :
Informa UK Limited, 2022.

Abstract

3 páginas In this study, we sequenced the first complete chloroplast (cp) genome of a Peruvian chili pepper landrace, “arnacucho” (Capsicum chinense). This cp genome has a 156,931 bp in length with typical quadripartite structure, containing a large single copy (LSC) region (87,325 bp) and a 17,912 bp small single-copy (SSC) region, separated by two inverted repeat (IR) regions (25,847 bp); and the percentage of GC content was 37.71%. Arnaucho chili pepper chloroplast genome possesses 133 genes that consists of 86 protein-coding genes, 37 tRNA, eight rRNA, and two pseudogenes. Phylogenetic analysis revealed that this Peruvian chili pepper landrace is closely related to the undomesticated species C. galapagoense; all belong to the Capsiceae tribe.

Details

ISSN :
23802359
Volume :
7
Database :
OpenAIRE
Journal :
Mitochondrial DNA Part B
Accession number :
edsair.doi.dedup.....6b3e6033e97848df2da1ffe60091ac6f
Full Text :
https://doi.org/10.1080/23802359.2021.2014366