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Developing a pathway-independent and full-autonomous global resource allocation strategy to dynamically switching phenotypic states
- Source :
- Nature Communications, Vol 11, Iss 1, Pp 1-14 (2020), Nature Communications
- Publication Year :
- 2020
- Publisher :
- Nature Publishing Group, 2020.
-
Abstract
- A grand challenge of biological chemical production is the competition between synthetic circuits and host genes for limited cellular resources. Quorum sensing (QS)-based dynamic pathway regulations provide a pathway-independent way to rebalance metabolic flux over the course of the fermentation. Most cases, however, these pathway-independent strategies only have capacity for a single QS circuit functional in one cell. Furthermore, current dynamic regulations mainly provide localized control of metabolic flux. Here, with the aid of engineering synthetic orthogonal quorum-related circuits and global mRNA decay, we report a pathway-independent dynamic resource allocation strategy, which allows us to independently controlling two different phenotypic states to globally redistribute cellular resources toward synthetic circuits. The strategy which could pathway-independently and globally self-regulate two desired cell phenotypes including growth and production phenotypes could totally eliminate the need for human supervision of the entire fermentation.<br />A challenge for biological chemical production is the completion between synthetic circuits and host resources. Here the authors the authors use quorum sensing circuits and global mRNA decay to independently control two phenotypic states.
- Subjects :
- 0106 biological sciences
0301 basic medicine
Computer science
Distributed computing
Science
RNA Stability
General Physics and Astronomy
MRNA Decay
01 natural sciences
General Biochemistry, Genetics and Molecular Biology
Article
03 medical and health sciences
010608 biotechnology
Escherichia coli
Production (economics)
lcsh:Science
Synthetic biology
Multidisciplinary
Escherichia coli Proteins
Fatty Acids
Quorum Sensing
General Chemistry
Gene Expression Regulation, Bacterial
Phenotype
Biosynthetic Pathways
Quorum sensing
030104 developmental biology
Metabolic Engineering
Fermentation
Biocatalysis
Resource allocation
lcsh:Q
Flux (metabolism)
Host (network)
Dynamic resource
Subjects
Details
- Language :
- English
- ISSN :
- 20411723
- Volume :
- 11
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- Nature Communications
- Accession number :
- edsair.doi.dedup.....69ae01772984f1cc69b1ae789d73e68f
- Full Text :
- https://doi.org/10.1038/s41467-020-19432-2