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Distributed Computation with Continual Population Growth

Authors :
Thomas Nowak
Corbin Hopper
Manish Kushwaha
Quentin Soubeyran
Da-Jung Cho
Matthias Függer
Universität Kassel [Kassel]
Centre National de la Recherche Scientifique (CNRS)
Laboratoire Spécification et Vérification (LSV)
Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Ecole Normale Supérieure Paris-Saclay (ENS Paris Saclay)
Ecole Normale Supérieure Paris-Saclay (ENS Paris Saclay)
Université Paris-Saclay
Modeling and Exploitation of Interaction and Concurrency (MEXICO)
Inria Saclay - Ile de France
Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Laboratoire Méthodes Formelles (LMF)
Institut National de Recherche en Informatique et en Automatique (Inria)-CentraleSupélec-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Ecole Normale Supérieure Paris-Saclay (ENS Paris Saclay)-CentraleSupélec-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Ecole Normale Supérieure Paris-Saclay (ENS Paris Saclay)
MICrobiologie de l'ALImentation au Service de la Santé (MICALIS)
AgroParisTech-Université Paris-Saclay-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
École polytechnique (X)
University of Kassel
Laboratoire Méthodes Formelles (LMF)
Institut National de Recherche en Informatique et en Automatique (Inria)-CentraleSupélec-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Ecole Normale Supérieure Paris-Saclay (ENS Paris Saclay)
Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
AgroParisTech
Département d'informatique de l'École polytechnique (X-DEP-INFO)
ANR-21-CE48-0003,DREAMY,Algorithmes distribués pour les systèmes microbiologiques(2021)
ANR-17-CE40-0013,FREDDA,Méthodes formelles pour la conception d'algorithmes distribués(2017)
Source :
DISC 2020-34th International Symposium on DIStributed Computing, DISC 2020-34th International Symposium on DIStributed Computing, 2020, virtual, Germany. p. 1-17, ⟨10.4230/LIPIcs.DISC.2020.6⟩, Distributed Computing, Distributed Computing, 2021, ⟨10.1007/s00446-021-00404-8⟩, Distributed Computing, Springer Verlag, 2021, ⟨10.1007/s00446-021-00404-8⟩
Publication Year :
2020
Publisher :
HAL CCSD, 2020.

Abstract

Computing with synthetically engineered bacteria is a vibrant and active field with numerous applications in bio-production, bio-sensing, and medicine. Motivated by the lack of robustness and by resource limitation inside single cells, distributed approaches with communication among bacteria have recently gained in interest. In this paper, we focus on the problem of population growth happening concurrently, and possibly interfering, with the desired bio-computation. Specifically, we present a fast protocol in systems with continuous population growth for the majority consensus problem and prove that it correctly identifies the initial majority among two inputs with high probability if the initial difference is Ω(√{nlog n}) where n is the total initial population. We also present a fast protocol that correctly computes the NAND of two inputs with high probability. We demonstrate that combining the NAND gate protocol with the continuous-growth majority consensus protocol, using the latter as an amplifier, it is possible to implement circuits computing arbitrary Boolean functions.<br />LIPIcs, Vol. 179, 34th International Symposium on Distributed Computing (DISC 2020), pages 7:1-7:17

Details

Language :
English
ISSN :
01782770 and 14320452
Database :
OpenAIRE
Journal :
DISC 2020-34th International Symposium on DIStributed Computing, DISC 2020-34th International Symposium on DIStributed Computing, 2020, virtual, Germany. p. 1-17, ⟨10.4230/LIPIcs.DISC.2020.6⟩, Distributed Computing, Distributed Computing, 2021, ⟨10.1007/s00446-021-00404-8⟩, Distributed Computing, Springer Verlag, 2021, ⟨10.1007/s00446-021-00404-8⟩
Accession number :
edsair.doi.dedup.....693e4d329b1b3f174d248a0292a5cc24
Full Text :
https://doi.org/10.4230/LIPIcs.DISC.2020.6⟩