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Fibrisoma montanum sp. nov., isolated from soil of Mountain Danxia, China
- Source :
- Archives of microbiology. 202(2)
- Publication Year :
- 2019
-
Abstract
- A Gram-stain-negative, non-motile, rod-shaped, aerobic bacterium, designated HYT19T, was isolated from soil of Mountain Danxia in southern China. It showed the highest similarity of 16S rRNA gene sequence (97.0%) and formed a monophyletic clade with Fibrisoma limi BUZ 3T. Strain HYT19T grew at 16–37 °C (optimum 28–30 °C) and at pH 6–7. The draft genome size of strain HYT19T was 7.8 Mb with a DNA G+C content of 54.0 mol%. The digital DDH and average nucleotide identity values between strain HYT19T and F. limi BUZ 3T were 28.8% and 85.1%, respectively. MK-7 was the sole respiratory quinone. The major polar lipids were phosphatidylethanolamine, unidentified aminophospholipid, two unidentified aminolipids, unidentified phospholipid and unidentified lipid. The strain contained C16:1ω5c, iso-C15:0, summed feature 3 (C16:1ω6c and/or C16:1ω7c), C16:0, iso-C17:0 3-OH and anteiso-C15:0 as the major fatty acids. On the basis of phylogenetic, genomic, phenotypic and chemotaxonomic analysis, we propose a new species Fibrisoma montanum sp. nov. of genus Fibrisoma. The type strain is HYT19T (= CCTCC AB 2018342T = JCM 33105T).
- Subjects :
- DNA, Bacterial
China
Cytophagaceae
Biology
Biochemistry
Microbiology
03 medical and health sciences
Monophyly
Soil
Microbial ecology
Genus
RNA, Ribosomal, 16S
Botany
Genetics
Clade
Molecular Biology
Genome size
Phospholipids
Phylogeny
Soil Microbiology
030304 developmental biology
0303 health sciences
Base Composition
Strain (chemistry)
Phylogenetic tree
030306 microbiology
Fatty Acids
General Medicine
Sequence Analysis, DNA
16S ribosomal RNA
Bacterial Typing Techniques
Genome, Bacterial
Subjects
Details
- ISSN :
- 1432072X
- Volume :
- 202
- Issue :
- 2
- Database :
- OpenAIRE
- Journal :
- Archives of microbiology
- Accession number :
- edsair.doi.dedup.....693db6b1dd04e8bfe382dd4e7ee49930