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Gas-Phase Protonation Thermochemistry of Arginine
- Source :
- Journal of Physical Chemistry B, Journal of Physical Chemistry B, American Chemical Society, 2008, 112 (11), pp.3410-3419. ⟨10.1021/jp709677c⟩
- Publication Year :
- 2008
- Publisher :
- American Chemical Society (ACS), 2008.
-
Abstract
- International audience; The gas-phase basicity (GB), proton affinity (PA), and protonation entropy (DeltapS degrees (M)=S degrees (MH+)-S degrees (M)) of arginine (Arg) have been experimentally determined by the extended kinetic method using an electrospray ionization quadrupole time-of-flight (ESI-Q-TOF) mass spectrometer. This method provides GB(Arg)=1004.3+/-2.2 (4.9) kJ.mol(-1) (indicated errors are standard deviations, and in parentheses, 95% confidence limits are given). Consideration of previous experimental data using a fast atom bombardment ionization tandem sector mass spectrometer slightly modifies these estimates since GB(Arg)=1005.9+/-3.1 (6.6) kJ.mol(-1). Lower limits of the proton affinity, PA(Arg)=1046+/-4 (7) kJ.mol(-1), and of the "protonation entropy", DeltapS degrees (Arg)=S degrees (ArgH+)-S degrees (Arg)=-27+/-7 (15) J.mol(-1).K(-1), are also provided by the experiments. Theoretical calculations conducted at the B3LYP/6-311+G(3df,2p)//B3LYP/6-31+G(d,p) level, including 298 K enthalpy correction, predict a proton affinity value of ca. 1053 kJ.mol-1 after consideration of isodesmic proton-transfer reactions with guanidine as the reference base. Computations including explicit treatment of hindered rotations and mixing of conformers confirm that a noticeable entropy loss does occur upon protonation, which leads to a theoretical DeltapS degrees (Arg) term of ca. -45 J.mol(-1).K(-1). The following evaluated thermochemical parameter values are proposed: GB(Arg)=1005+/-3 kJ.mol(-1); PA(Arg)=1051+/-5 kJ.mol(-1), and DeltapS degrees (Arg)=-45+/-12 J.mol(-1).K(-1).
- Subjects :
- Models, Molecular
Spectrometry, Mass, Electrospray Ionization
010401 analytical chemistry
Arginine
010402 general chemistry
01 natural sciences
0104 chemical sciences
Surfaces, Coatings and Films
[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistry
Kinetics
Materials Chemistry
Thermodynamics
Gases
Protons
Physical and Theoretical Chemistry
Algorithms
Guanidine
Subjects
Details
- ISSN :
- 15205207 and 15206106
- Volume :
- 112
- Database :
- OpenAIRE
- Journal :
- The Journal of Physical Chemistry B
- Accession number :
- edsair.doi.dedup.....66d853edfc58c903112947313c51dec1
- Full Text :
- https://doi.org/10.1021/jp709677c