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Identification and functional characterization of microRNAs reveal a potential role in gastric cancer progression

Authors :
Yanqiu Zhang
Chengyun Li
Hui Peng
W.-H. Zhang
Wei-Wei Hong
Z.-Y. Zhang
Wenzhuo Yao
Y.-C. Ye
Lihong Yin
Xian Shen
Geyu Liang
Jing Sui
Yue Pu Pu
Source :
Clinicaltranslational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico. 19(2)
Publication Year :
2016

Abstract

To investigate the potential candidate microRNA (miRNA) biomarkers for the clinical diagnosis, classification, and prognosis of gastric cancer (GC). We use bioinformatics overlapping subclasses analysis to find the tumor grade and lymphatic metastasis-related GC specific miRNAs from the Cancer Genome Atlas (TCGA) database. Then, we further investigated these GC specific miRNAs distributions in different GC clinical features and their correlations overall survival on the basis of GC patients’ information and their related RNA sequencing profile from TCGA. Finally, we randomly selected some of key miRNAs use qRT-PCR to confirm the reliability and validity. 22 GC specific key miRNAs were identified (Fold-change >2, P

Details

ISSN :
16993055
Volume :
19
Issue :
2
Database :
OpenAIRE
Journal :
Clinicaltranslational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico
Accession number :
edsair.doi.dedup.....66cd6ec235bdd46665b61b915cb35e68