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Identification and functional characterization of microRNAs reveal a potential role in gastric cancer progression
- Source :
- Clinicaltranslational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico. 19(2)
- Publication Year :
- 2016
-
Abstract
- To investigate the potential candidate microRNA (miRNA) biomarkers for the clinical diagnosis, classification, and prognosis of gastric cancer (GC). We use bioinformatics overlapping subclasses analysis to find the tumor grade and lymphatic metastasis-related GC specific miRNAs from the Cancer Genome Atlas (TCGA) database. Then, we further investigated these GC specific miRNAs distributions in different GC clinical features and their correlations overall survival on the basis of GC patients’ information and their related RNA sequencing profile from TCGA. Finally, we randomly selected some of key miRNAs use qRT-PCR to confirm the reliability and validity. 22 GC specific key miRNAs were identified (Fold-change >2, P
- Subjects :
- 0301 basic medicine
Oncology
Male
Cancer Research
medicine.medical_specialty
Lymphatic metastasis
Adenocarcinoma
Bioinformatics
Metastasis
03 medical and health sciences
0302 clinical medicine
Stomach Neoplasms
Internal medicine
microRNA
medicine
Biomarkers, Tumor
Humans
Survival rate
Aged
Neoplasm Staging
Oligonucleotide Array Sequence Analysis
business.industry
Gene Expression Profiling
Case-control study
Computational Biology
General Medicine
Middle Aged
medicine.disease
Prognosis
Gene expression profiling
Gene Expression Regulation, Neoplastic
Survival Rate
MicroRNAs
030104 developmental biology
Lymphatic system
030220 oncology & carcinogenesis
Case-Control Studies
Lymphatic Metastasis
Disease Progression
Female
Neoplasm Grading
business
Follow-Up Studies
Subjects
Details
- ISSN :
- 16993055
- Volume :
- 19
- Issue :
- 2
- Database :
- OpenAIRE
- Journal :
- Clinicaltranslational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico
- Accession number :
- edsair.doi.dedup.....66cd6ec235bdd46665b61b915cb35e68