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Differences in Gene-Gene Interactions in Graves' Disease Patients Stratified by Age of Onset
- Source :
- PLoS ONE, Vol 11, Iss 3, p e0150307 (2016), PLoS ONE
- Publication Year :
- 2016
- Publisher :
- Public Library of Science (PLoS), 2016.
-
Abstract
- Background Graves’ disease (GD) is a complex disease in which genetic predisposition is modified by environmental factors. Each gene exerts limited effects on the development of autoimmune disease (OR = 1.2–1.5). An epidemiological study revealed that nearly 70% of the risk of developing inherited autoimmunological thyroid diseases (AITD) is the result of gene interactions. In the present study, we analyzed the effects of the interactions of multiple loci on the genetic predisposition to GD. The aim of our analyses was to identify pairs of genes that exhibit a multiplicative interaction effect. Material and Methods A total of 709 patients with GD were included in the study. The patients were stratified into more homogeneous groups depending on the age at time of GD onset: younger patients less than 30 years of age and older patients greater than 30 years of age. Association analyses were performed for genes that influence the development of GD: HLADRB1, PTPN22, CTLA4 and TSHR. The interactions among polymorphisms were analyzed using the multiple logistic regression and multifactor dimensionality reduction (MDR) methods. Results GD patients stratified by the age of onset differed in the allele frequencies of the HLADRB1*03 and 1858T polymorphisms of the PTPN22 gene (OR = 1.7, p = 0.003; OR = 1.49, p = 0.01, respectively). We evaluated the genetic interactions of four SNPs in a pairwise fashion with regard to disease risk. The coexistence of HLADRB1 with CTLA4 or HLADRB1 with PTPN22 exhibited interactions on more than additive levels (OR = 3.64, p = 0.002; OR = 4.20, p < 0.001, respectively). These results suggest that interactions between these pairs of genes contribute to the development of GD. MDR analysis confirmed these interactions. Conclusion In contrast to a single gene effect, we observed that interactions between the HLADRB1/PTPN22 and HLADRB1/CTLA4 genes more closely predicted the risk of GD onset in young patients.
- Subjects :
- 0301 basic medicine
Male
Heredity
Multifactor Dimensionality Reduction
Epidemiology
lcsh:Medicine
0302 clinical medicine
Gene Frequency
Medicine and Health Sciences
Odds Ratio
Age of Onset
lcsh:Science
Multidisciplinary
Smoking
Graves Disease
Genetic Mapping
Oncology
Genetic Epidemiology
Female
Research Article
Adult
Immunology
030209 endocrinology & metabolism
Single-nucleotide polymorphism
Variant Genotypes
Biology
Genetic Predisposition
Autoimmune Diseases
PTPN22
03 medical and health sciences
Genetic predisposition
Genetics
Humans
Genetic Predisposition to Disease
Allele
Allele frequency
Alleles
Multifactor dimensionality reduction
lcsh:R
Biology and Life Sciences
Human Genetics
Epistasis, Genetic
030104 developmental biology
Genetic epidemiology
Genetic Loci
Graves' Disease
Genetics of Disease
Clinical Immunology
lcsh:Q
Age of onset
Clinical Medicine
Subjects
Details
- Language :
- English
- ISSN :
- 19326203
- Volume :
- 11
- Issue :
- 3
- Database :
- OpenAIRE
- Journal :
- PLoS ONE
- Accession number :
- edsair.doi.dedup.....66a686e9798c5ce5c95a8fe5557a86de