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Investigation of binding interaction behavior between antiemetic drugs and Trypsin by spectroscopy and molecular docking
- Source :
- Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy. 258:119817
- Publication Year :
- 2021
- Publisher :
- Elsevier BV, 2021.
-
Abstract
- Antiemetic drugs are used to control excessive vomiting and nausea and generally absorbed through gastrointestinal tract. In present study, the in-vitro binding interactions two of the antiemetic drugs (dimen-hydrinate and ondansetron) between Trypsin (Tsn) secreted from pancreas to small intestine for protein digestion were investigated by fluorescence emission spectroscopy (FES), UV-VIS spectroscopy, synchronous fluorescence spectroscopy (SFS), FT-IR spectroscopy and molecular modeling methods. Also, the effect of these drugs on the catalytic activity of Tsn was determined. The fluorescence quenching experiments indicated that each drugs quenched the intrinsic fluorescence of Tsn with their increased concentrations. The results of SFS and UV-VIS spectra proved the interaction of dimenhydrinate and ondansetron with Tsn. FT-IR spectra showed that the secondary structure of enzyme was altered in the presence of the drugs. All these spectroscopy results were validated and explained by molecular docking studies. Both drugs have inhibition effect on the catalytic activity of Tsn and the IC50 values were determined as 2.6 x 10(-4) M and 6.4 x 10(-4) M for dimenhydrinate and ondansetron, respectively. Docking results revealed that the hydrogen bond interaction of dimenhydrinate with active-site residue Ser195 and ondansetron with active-site residues His57 and Ser195 hydrogen bonds might be cause the inhibition of enzyme activity. The results of this study can provide valuable information in the field of pharmacokinetics and pharmacodynamics. (C) 2021 Elsevier B.V. All rights reserved.
- Subjects :
- Protein digestion
02 engineering and technology
010402 general chemistry
01 natural sciences
Analytical Chemistry
Pharmacokinetics
Spectroscopy, Fourier Transform Infrared
medicine
Trypsin
Spectroscopy
Instrumentation
Protein secondary structure
Binding Sites
Hydrogen bond
Chemistry
Hydrogen Bonding
021001 nanoscience & nanotechnology
Dimenhydrinate
Atomic and Molecular Physics, and Optics
0104 chemical sciences
Molecular Docking Simulation
Spectrometry, Fluorescence
Docking (molecular)
Biophysics
Antiemetics
Thermodynamics
0210 nano-technology
Protein Binding
medicine.drug
Subjects
Details
- ISSN :
- 13861425
- Volume :
- 258
- Database :
- OpenAIRE
- Journal :
- Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy
- Accession number :
- edsair.doi.dedup.....64d8ffa6540737151d7601d1cf598e6d
- Full Text :
- https://doi.org/10.1016/j.saa.2021.119817