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Single-Stranded DNA-Binding Proteins in the Archaea
- Source :
- Single Stranded DNA Binding Proteins, Single Stranded DNA Binding Proteins, 2281, Springer US; Springer US, pp.23-47, 2021, Methods in Molecular Biology, 978-1-07-161290-3. ⟨10.1007/978-1-0716-1290-3_2⟩, Methods in Molecular Biology ISBN: 9781071612897
- Publication Year :
- 2021
- Publisher :
- HAL CCSD, 2021.
-
Abstract
- International audience; Single-stranded (ss) DNA-binding proteins are found in all three domains of life where they play vital roles in nearly all aspects of DNA metabolism by binding to and stabilizing exposed ssDNA and acting as platforms onto which DNA-processing activities can assemble. The ssDNA-binding factors SSB and RPA are extremely well conserved across bacteria and eukaryotes, respectively, and comprise one or more OB-fold ssDNA-binding domains. In the third domain of life, the archaea, multiple types of ssDNA-binding protein are found with a variety of domain architectures and subunit compositions, with OB-fold ssDNA-binding domains being a characteristic of most, but not all. This chapter summarizes current knowledge of the distribution, structure, and biological function of the archaeal ssDNA-binding factors, highlighting key features shared between clades and those that distinguish the proteins of different clades from one another. The likely cellular functions of the proteins are discussed and gaps in current knowledge identified.
- Subjects :
- DNA repair
Protein subunit
Replication protein A
MESH: DNA Replication
Computational biology
DNA replication
[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics, Phylogenetics and taxonomy
03 medical and health sciences
Phylogenetics
Three-domain system
ssDNA
MESH: Protein Binding
MESH: Species Specificity
MESH: Phylogeny
SSB
030304 developmental biology
MESH: DNA Repair
0303 health sciences
biology
MESH: DNA, Archaeal
030302 biochemistry & molecular biology
[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular biology
MESH: Archaeal Proteins
biology.organism_classification
Archaea
[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology
enzymes and coenzymes (carbohydrates)
MESH: DNA, Single-Stranded
OB fold
MESH: Archaea
MESH: Protein Domains
Single-stranded DNA
Bacteria
RPA
MESH: DNA-Binding Proteins
MESH: Models, Molecular
Subjects
Details
- Language :
- English
- ISBN :
- 978-1-07-161290-3
978-1-07-161289-7 - ISBNs :
- 9781071612903 and 9781071612897
- Database :
- OpenAIRE
- Journal :
- Single Stranded DNA Binding Proteins, Single Stranded DNA Binding Proteins, 2281, Springer US; Springer US, pp.23-47, 2021, Methods in Molecular Biology, 978-1-07-161290-3. ⟨10.1007/978-1-0716-1290-3_2⟩, Methods in Molecular Biology ISBN: 9781071612897
- Accession number :
- edsair.doi.dedup.....64cfddb15a8fe9bcf38ea2bb8db73dfc