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dsSurvival: Privacy preserving survival models for federated individual patient meta-analysis in DataSHIELD

Authors :
Soumya Banerjee
Ghislain N. Sofack
Thodoris Papakonstantinou
Demetris Avraam
Paul Burton
Daniela Zöller
Tom R.P. Bishop
Banerjee, Soumya [0000-0001-7748-9885]
Apollo - University of Cambridge Repository
Source :
Banerjee, S, Sofack, G N, Papakonstantinou, T, Avraam, D, Burton, P, Zöller, D & Bishop, T R P 2022, ' dsSurvival : Privacy preserving survival models for federated individual patient meta-analysis in DataSHIELD ', BMC Research Notes, vol. 15, no. 1, 197 . https://doi.org/10.1186/s13104-022-06085-1
Publisher :
BioMed Central

Abstract

Objective Achieving sufficient statistical power in a survival analysis usually requires large amounts of data from different sites. Sensitivity of individual-level data, ethical and practical considerations regarding data sharing across institutions could be a potential challenge for achieving this added power. Hence we implemented a federated meta-analysis approach of survival models in DataSHIELD, where only anonymous aggregated data are shared across institutions, while simultaneously allowing for exploratory, interactive modelling. In this case, meta-analysis techniques to combine analysis results from each site are a solution, but an analytic workflow involving local analysis undertaken at individual studies hinders exploration. Thus, the aim is to provide a framework for performing meta-analysis of Cox regression models across institutions without manual analysis steps for the data providers. Results We introduce a package (dsSurvival) which allows privacy preserving meta-analysis of survival models, including the calculation of hazard ratios. Our tool can be of great use in biomedical research where there is a need for building survival models and there are privacy concerns about sharing data.

Details

Database :
OpenAIRE
Journal :
Banerjee, S, Sofack, G N, Papakonstantinou, T, Avraam, D, Burton, P, Zöller, D & Bishop, T R P 2022, ' dsSurvival : Privacy preserving survival models for federated individual patient meta-analysis in DataSHIELD ', BMC Research Notes, vol. 15, no. 1, 197 . https://doi.org/10.1186/s13104-022-06085-1
Accession number :
edsair.doi.dedup.....6434d6a8b73234a7d369d02c4013497f
Full Text :
https://doi.org/10.1186/s13104-022-06085-1