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Development of epithelial-mesenchymal transition-related lncRNA signature for predicting survival and immune microenvironment in pancreatic cancerwithexperiment validation

Authors :
Guangfu Wang
Qun Chen
Yong Gao
Baobao Cai
Kuirong Jiang
Jinhui Liu
Yi Miao
Zipeng Lu
Source :
Bioengineered, article-version (VoR) Version of Record, Bioengineered, Vol 12, Iss 2, Pp 10553-10567 (2021)
Publication Year :
2021
Publisher :
Taylor & Francis, 2021.

Abstract

Long non-coding RNAs (LncRNAs) have crucial function in epithelial–mesenchymal transition (EMT) in pancreatic cancer. It is necessary to comprehensively analyze the potential role of EMT-related lncRNA in pancreatic cancer. In the present study, genomic data of pancreatic cancer from the TCGA database were downloaded and we found 368 EMT-related lncRNAs. According to the expression characteristics of prognostic-related lncRNAs, all samples could be divided into two clusters with different clinical outcomes and different tumor microenvironments. Moreover, an eleven EMT-related lncRNAs signature was established and verified. Patients with pancreatic cancer in the high-risk group had a shorter overall survival than those in the low-risk group and the signature could act as an independent prognostic factor. Further analysis suggested that the EMT-related lncRNAs might affect the prognosis of patients through immune mechanisms. All findings indicated that the signature and eleven lncRNAs might serve as potential prognostic biomarkers and therapeutic targets in the treatment of pancreatic cancer.

Details

Language :
English
ISSN :
21655987 and 21655979
Volume :
12
Issue :
2
Database :
OpenAIRE
Journal :
Bioengineered
Accession number :
edsair.doi.dedup.....62ecd845a89c5b5d2f02b5a8f8c8c2e8