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Development of epithelial-mesenchymal transition-related lncRNA signature for predicting survival and immune microenvironment in pancreatic cancerwithexperiment validation
- Source :
- Bioengineered, article-version (VoR) Version of Record, Bioengineered, Vol 12, Iss 2, Pp 10553-10567 (2021)
- Publication Year :
- 2021
- Publisher :
- Taylor & Francis, 2021.
-
Abstract
- Long non-coding RNAs (LncRNAs) have crucial function in epithelial–mesenchymal transition (EMT) in pancreatic cancer. It is necessary to comprehensively analyze the potential role of EMT-related lncRNA in pancreatic cancer. In the present study, genomic data of pancreatic cancer from the TCGA database were downloaded and we found 368 EMT-related lncRNAs. According to the expression characteristics of prognostic-related lncRNAs, all samples could be divided into two clusters with different clinical outcomes and different tumor microenvironments. Moreover, an eleven EMT-related lncRNAs signature was established and verified. Patients with pancreatic cancer in the high-risk group had a shorter overall survival than those in the low-risk group and the signature could act as an independent prognostic factor. Further analysis suggested that the EMT-related lncRNAs might affect the prognosis of patients through immune mechanisms. All findings indicated that the signature and eleven lncRNAs might serve as potential prognostic biomarkers and therapeutic targets in the treatment of pancreatic cancer.
- Subjects :
- Prognostic factor
Epithelial-Mesenchymal Transition
Genomic data
Immune microenvironment
Bioengineering
Biology
epithelial–mesenchymal transition
Applied Microbiology and Biotechnology
Cohort Studies
lncRNA
Risk Factors
Pancreatic cancer
medicine
Tumor Microenvironment
Cluster Analysis
Humans
Epithelial–mesenchymal transition
prognostic signature
Immune mechanisms
Proportional Hazards Models
Tumor microenvironment
Gene Expression Profiling
Reproducibility of Results
General Medicine
medicine.disease
Prognosis
Survival Analysis
Gene Expression Regulation, Neoplastic
Pancreatic Neoplasms
Cancer research
RNA, Long Noncoding
tumorenvironment
Function (biology)
TP248.13-248.65
Biotechnology
Research Article
Research Paper
Subjects
Details
- Language :
- English
- ISSN :
- 21655987 and 21655979
- Volume :
- 12
- Issue :
- 2
- Database :
- OpenAIRE
- Journal :
- Bioengineered
- Accession number :
- edsair.doi.dedup.....62ecd845a89c5b5d2f02b5a8f8c8c2e8