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Unusual −1 Ribosomal Frameshift Caused by Stable RNA G-Quadruplex in Open Reading Frame
- Source :
- Analytical Chemistry. 85:11435-11439
- Publication Year :
- 2013
- Publisher :
- American Chemical Society (ACS), 2013.
-
Abstract
- Tertiary structures formed by mRNAs impact the efficiency of the translation reaction. Ribosomal frameshift is a well-characterized recoding process that occurs during translation elongation. Pseudoknot and stem-loop structures may stimulate frameshifting by causing a translational halt at a slippery sequence. In this study, we evaluated the efficiency of an unusual -1 frameshift caused by a noncanonical RNA G-quadruplex structure in mammalian cells. The reporter gene construct consisting of a fluorescent protein and Luciferase enabled evaluation of apparent and absolute values of the -1 frameshift efficiency and revealed significant increase of the efficiency by G-quadrupex forming potential sequence. In addition, berberine, a small molecule that binds to and stabilizes G-quadruplex structures, further increased the frameshift efficiency. These results indicate that the stable G-quadruplex structure stimulates the unusual -1 frameshift and has a potential to regulate the frameshift with its ligand.
- Subjects :
- Base Sequence
Chemistry
Molecular Sequence Data
Frameshifting, Ribosomal
RNA
Translation (biology)
Slippery sequence
G-quadruplex
Ribosomal frameshift
Protein Structure, Tertiary
Analytical Chemistry
Frameshift mutation
Cell biology
G-Quadruplexes
Open Reading Frames
Open reading frame
MCF-7 Cells
Humans
Pseudoknot
Subjects
Details
- ISSN :
- 15206882 and 00032700
- Volume :
- 85
- Database :
- OpenAIRE
- Journal :
- Analytical Chemistry
- Accession number :
- edsair.doi.dedup.....62b013ce028a02a6136d3b0fcc57275d