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Circular RNA expression profiling of human granulosa cells during maternal aging reveals novel transcripts associated with assisted reproductive technology outcomes
- Source :
- PLoS ONE, Vol 12, Iss 6, p e0177888 (2017), PLoS ONE
- Publication Year :
- 2017
- Publisher :
- Public Library of Science (PLoS), 2017.
-
Abstract
- Circular RNAs (circRNAs) are a unique class of endogenous RNAs which could be used as potential diagnostic and prognostic biomarkers of many diseases. Our study aimed to investigate circRNA profiles in human granulosa cells (GCs) during maternal aging and to uncover age-related circRNA variations that potentially reflect decreased oocyte competence. CircRNAs in GCs from in vitro fertilization (IVF) patients with young age (YA, ≤ 30 years) and advanced age (AA, ≥ 38 years) were profiled by microarray, and validated in 20 paired samples. The correlation between circRNAs expression and clinical characteristics was analyzed in additional 80 samples. Chip-based analysis revealed 46 up-regulated and 11 down-regulated circRNAs in AA samples (fold change > 2.0). Specifically, circRNA_103829, circRNA_103827 and circRNA_104816 were validated to be up-regulated, while circRNA_101889 was down-regulated in AA samples. After adjustment for gonadotropin treatment, only circRNA_103827 and circRNA_104816 levels were positively associated with maternal age (partial r = 0.332, P = 0.045; partial r = 0.473, P = 0.003; respectively). Moreover, circRNA_103827 and circRNA_104816 expressions in GCs were negatively correlated with the number of top quality embryos (r = -0.235, P = 0.036; r = -0.221, P = 0.049; respectively). Receiver operating characteristic (ROC) curve analysis indicated that the performance of circRNA_103827 for live birth prediction reached 0.698 [0.570–0.825], with 77.2% sensitivity and 60.9% specificity (P = 0.006), and that of circRNA_104816 was 0.645 [0.507–0.783] (P = 0.043). Bioinformatics analysis revealed that both circRNAs were potentially involved in glucose metabolism, mitotic cell cycle, and ovarian steroidogenesis. Therefore, age-related up-regulation of circRNA_103827 and circRNA_104816 might be potential indicators of compromised follicular micro-environment which could be used to predict IVF prognosis, and improve female infertility management.
- Subjects :
- Adult
0301 basic medicine
Aging
medicine.medical_specialty
Microarray
lcsh:Medicine
Fertilization in Vitro
Biology
Polymerase Chain Reaction
03 medical and health sciences
Mitotic cell cycle
Circular RNA
Internal medicine
Follicular phase
microRNA
medicine
Humans
Prospective Studies
RNA, Messenger
lcsh:Science
Granulosa Cells
Multidisciplinary
Microarray analysis techniques
Gene Expression Profiling
lcsh:R
Computational Biology
RNA, Circular
Microarray Analysis
Prognosis
Fold change
Gene expression profiling
MicroRNAs
030104 developmental biology
Endocrinology
ROC Curve
Oocytes
RNA
Female
lcsh:Q
Live Birth
Biomarkers
Maternal Age
Research Article
Subjects
Details
- ISSN :
- 19326203
- Volume :
- 12
- Database :
- OpenAIRE
- Journal :
- PLOS ONE
- Accession number :
- edsair.doi.dedup.....61f58245e72bce880323cc6701ad0534
- Full Text :
- https://doi.org/10.1371/journal.pone.0177888