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Engineering self-organized criticality in living cells

Authors :
Josep Sardanyés
Ricard V. Solé
Antoni Guillamon
Nuria Conde
Jordi Pla
Blai Vidiella
Victor Maull
Fundación Botín
Ministerio de Ciencia, Innovación y Universidades (España)
Agencia Estatal de Investigación (España)
European Commission
Agència de Gestió d'Ajuts Universitaris i de Recerca
Santa Fe Institute (US)
Generalitat de Catalunya
Universitat Politècnica de Catalunya. Departament de Matemàtiques
Universitat Politècnica de Catalunya. SD - Sistemes Dinàmics de la UPC
Source :
UPCommons. Portal del coneixement obert de la UPC, Universitat Politècnica de Catalunya (UPC), Nature Communications, Nature Communications, Vol 12, Iss 1, Pp 1-10 (2021), Digital.CSIC. Repositorio Institucional del CSIC, instname
Publication Year :
2021
Publisher :
Springer Science and Business Media LLC, 2021.

Abstract

Complex dynamical fluctuations, from intracellular noise, brain dynamics or computer traffic display bursting dynamics consistent with a critical state between order and disorder. Living close to the critical point has adaptive advantages and it has been conjectured that evolution could select these critical states. Is this the case of living cells? A system can poise itself close to the critical point by means of the so-called self-organized criticality (SOC). In this paper we present an engineered gene network displaying SOC behaviour. This is achieved by exploiting the saturation of the proteolytic degradation machinery in E. coli cells by means of a negative feedback loop that reduces congestion. Our critical motif is built from a two-gene circuit, where SOC can be successfully implemented. The potential implications for both cellular dynamics and behaviour are discussed.<br />This work was supported by the Botin Foundation by Banco Santander through its Santander Universities Global Division, the Spanish Ministry of Economy and Competitiveness, grant AEI-PID2019-111680GB-I00/AEI/10.13039/501100011033, an AGAUR FI 2018 grant, and the Santa Fe Institute (where the key idea was conceived). J.S. and A.G. have been partially funded by the CERCA Programme of the Generalitat de Catalunya. J.S. acknowledges support from Agencia Estatal de Investigación grant RTI2018-098322-B-I00 and Ramón y Cajal contract RYC-2017-22243. A.G. has been funded by the AGAUR grant 2017-SGR-1049 and by the MINECO-FEDER-UE grants PGC-2018-098676-B-100 and RTI2018-093860-B-C21.

Details

ISSN :
20411723
Volume :
12
Database :
OpenAIRE
Journal :
Nature Communications
Accession number :
edsair.doi.dedup.....61c1aeff00459ad1d0343c5d81ee262c
Full Text :
https://doi.org/10.1038/s41467-021-24695-4